Detailed information NTG0542467

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LNN49_RS00870
• Genome accession: NZ_CP086500
• Coordinates: 182222..183205 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain Ec-050-T5-MAC
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 177222..188205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LNN49_RS00855 (LNN49_00855)	dppA	178365..179972 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
LNN49_RS26240	-	180006..180116 (-)	111	Protein_169	hypothetical protein	-
LNN49_RS00860 (LNN49_00860)	dppB	180280..181299 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LNN49_RS00865 (LNN49_00865)	dppC	181309..182211 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LNN49_RS00870 (LNN49_00870)	amiE	182222..183205 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LNN49_RS00875 (LNN49_00875)	amiE	183202..184206 (+)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
LNN49_RS00880 (LNN49_00880)	yhjV	184236..185507 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LNN49_RS00885 (LNN49_00885)	ldrD	185983..186090 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LNN49_RS00890 (LNN49_00890)	bcsG	186177..187856 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
LNN49_RS00895 (LNN49_00895)	bcsF	187853..188044 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=542467 LNN49_RS00870 WP_001196486.1 182222..183205(+) (amiE) [Escherichia coli strain Ec-050-T5-MAC]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=542467 LNN49_RS00870 WP_001196486.1 182222..183205(+) (amiE) [Escherichia coli strain Ec-050-T5-MAC]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404