Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   JS608_RS17675 Genome accession   NZ_CP071042
Coordinates   3555721..3558027 (-) Length   768 a.a.
NCBI ID   WP_044052948.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens isolate ELA1901024     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3550721..3563027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JS608_RS17635 (JS608_03529) - 3551181..3551612 (+) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -
  JS608_RS17640 (JS608_03530) - 3551612..3551953 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  JS608_RS17645 (JS608_03531) - 3551946..3553427 (+) 1482 WP_043867375.1 Na+/H+ antiporter subunit D -
  JS608_RS17650 (JS608_03532) - 3553433..3553909 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  JS608_RS17655 (JS608_03533) - 3553909..3554193 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  JS608_RS17660 (JS608_03534) mnhG 3554177..3554551 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  JS608_RS17665 (JS608_03535) - 3554591..3554974 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  JS608_RS17670 (JS608_03536) comA 3554996..3555640 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  JS608_RS17675 (JS608_03537) comP 3555721..3558027 (-) 2307 WP_044052948.1 sensor histidine kinase Regulator
  JS608_RS17680 (JS608_03538) comX 3558046..3558222 (-) 177 WP_044052947.1 competence pheromone ComX -
  JS608_RS17685 (JS608_03539) - 3558237..3559112 (-) 876 WP_026092320.1 polyprenyl synthetase family protein -
  JS608_RS17690 (JS608_03540) degQ 3559264..3559404 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JS608_RS17695 (JS608_03542) - 3559870..3560211 (+) 342 WP_014305721.1 hypothetical protein -
  JS608_RS17700 (JS608_03543) - 3560218..3561438 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89260.54 Da        Isoelectric Point: 8.3570

>NTDB_id=542466 JS608_RS17675 WP_044052948.1 3555721..3558027(-) (comP) [Bacillus amyloliquefaciens isolate ELA1901024]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNSKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAFILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTSIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEISSDGDILYFDKQNSEPNWQPYKKEFVKVSSEIGKIF
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=542466 JS608_RS17675 WP_044052948.1 3555721..3558027(-) (comP) [Bacillus amyloliquefaciens isolate ELA1901024]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATAGTAAAATAGACTTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTTTATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCCTTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTTTTGGAAATGATGGTCGTCTATACATCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTATTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAATAAAATCTACGATATAGACTTCTTGTTGGGCAGAATTAGATACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTTCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATATTTAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAACCAAGTGTTTATGAATCTTAA
AAAGACGATATTAGATGTGTTGCCTGTCAGTAAGGCATATATCTTTGAAATCAGTTCTGACGGAGATATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCTCATCAGAGATTGGCAAGATTTTT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAAGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594