Detailed information NTG0542083

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: JYB86_RS05060
• Genome accession: NZ_CP070997
• Coordinates: 1056966..1059368 (+)
• Length: 800 a.a.
• NCBI ID: WP_205779598.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain LYS68A
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1056196..1064048	1056966..1059368	within	0

Gene organization within MGE regions

Location: 1056196..1064048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JYB86_RS05055 (JYB86_05055)	lolD	1056196..1056879 (+)	684	WP_005176563.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
JYB86_RS05060 (JYB86_05060)	comA/comEC	1056966..1059368 (+)	2403	WP_205779598.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JYB86_RS05065 (JYB86_05065)	-	1059365..1060309 (-)	945	WP_205779599.1	lysophospholipid acyltransferase family protein	-
JYB86_RS05070 (JYB86_05070)	sppA	1060440..1061465 (+)	1026	WP_168383997.1	signal peptide peptidase SppA	-
JYB86_RS05075 (JYB86_05075)	-	1061462..1062265 (+)	804	WP_005176572.1	alpha/beta fold hydrolase	-
JYB86_RS05080 (JYB86_05080)	purN	1062342..1062971 (-)	630	WP_205779600.1	phosphoribosylglycinamide formyltransferase	-
JYB86_RS05085 (JYB86_05085)	purM	1062978..1064048 (-)	1071	WP_005176576.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 91464.42 Da
• Isoelectric Point: 7.2867

>NTDB_id=542083 JYB86_RS05060 WP_205779598.1 1056966..1059368(+) (comA/comEC) [Acinetobacter indicus strain LYS68A]
MFKIMGAGWILGIACMGKTLWPMLDFPLWLSGLLLIILLLQQIAALHWSHLGIQLINTCVAFVITFLLGLNFAQNQLQER
LIFRELTRQPAEVVVYVQQINQLGSSQIRQPVQVLNRHSQPVQWLALLPAEQELQLGRYYRLQGQTLPAHSFAVPGAFDV
EQWYLQQNIMSGFQVHSMTELTESELYRLGFGAHLRQHQQLWPQFKLWIETQRLQIRDFIQQQALQHPGLILALLTGDKS
LLDEATEQQFQRFGMSHLLAISGPHVLIFAAMLCFVLQRLVTRYWPELYAQLPRSYLLLLPFMGCVFVYCAYVGFEIPAL
RTLLICLVAGACLLLKQPIQPLSLLIGSASLLLLLDPLSVLSTAFWLSYGACFVLLRIYQTLRQQPVHPQQTLMQKLWQG
FRLLFESQWKIFIALFPLMIIFFKQIAWIAPLSNLLAIPWIGLVTVPLDILAGLSFYLAEPLSQLLFQLNDLALSLLLGC
LQLLDLLFVPQLIPVALSPPMLLSLVLGLMILFLPAGLVPKAWSALCLLPLLFQDQFSRQVELSVLDVGQGQAIFLRYRE
HSMMIDMGGHYDEQKWSIGRQIIQPFLSVKGVQQLDYLWLTHLDQDHSGAYQTLKPQLQVQQVYANAQLEVNPHSHFDYC
QQGQQWQWQPGIQIQVLSPKPEQLNPVEQQKNESSCVLLVEFAQAQPYSRFLLMGDAGWPTEYQLLQDYPDLKADVLVLG
HHGSRHSSSYQFLKQLEPKLAIASAGLNNRYGHPSTQVQARLNALKIPLWQTVQQGSIQFYPTENEVLPYRHTRVWLLRD

Nucleotide

• Length: 2403 bp

>NTDB_id=542083 JYB86_RS05060 WP_205779598.1 1056966..1059368(+) (comA/comEC) [Acinetobacter indicus strain LYS68A]
ATGTTCAAAATCATGGGTGCCGGCTGGATTTTAGGCATTGCCTGTATGGGCAAAACGCTATGGCCGATGCTGGACTTCCC
GCTCTGGTTGTCAGGCCTGTTACTGATTATCCTGCTTTTACAGCAAATAGCTGCTTTACATTGGTCCCATCTGGGCATCC
AATTGATTAATACCTGTGTGGCATTTGTCATTACATTTTTGTTGGGGCTGAATTTTGCCCAAAACCAGTTGCAAGAGCGG
TTGATATTTCGTGAACTGACCCGCCAGCCGGCAGAGGTGGTGGTCTATGTCCAGCAAATCAATCAGCTGGGTAGCAGCCA
GATCCGGCAACCGGTTCAGGTGCTGAACCGGCATAGCCAGCCGGTGCAATGGCTGGCCTTGCTGCCGGCTGAACAGGAAC
TGCAGCTGGGGCGTTATTATCGTTTACAGGGGCAGACCTTGCCGGCGCACAGTTTTGCCGTTCCGGGTGCGTTTGATGTA
GAGCAGTGGTATCTCCAGCAAAATATCATGAGCGGCTTTCAGGTCCATTCGATGACAGAACTGACTGAATCGGAGCTGTA
TCGGCTGGGATTTGGGGCACATTTAAGACAGCATCAGCAACTCTGGCCGCAATTTAAATTGTGGATCGAAACACAACGTT
TACAGATTCGTGACTTTATCCAGCAGCAGGCATTGCAGCATCCCGGCTTAATACTGGCACTGCTGACTGGCGATAAAAGT
TTACTCGATGAAGCCACCGAGCAGCAGTTTCAGCGTTTCGGGATGAGTCATTTGCTGGCGATTTCCGGGCCGCATGTGCT
GATTTTTGCCGCCATGCTGTGTTTTGTGCTGCAGCGCCTGGTCACTCGCTATTGGCCCGAATTATATGCGCAATTGCCCC
GAAGTTATCTGCTGTTGCTGCCGTTTATGGGCTGTGTATTTGTATATTGTGCCTATGTTGGGTTTGAAATTCCTGCGCTC
AGGACTTTACTGATTTGTCTGGTGGCAGGCGCCTGCCTGTTGCTAAAGCAGCCGATACAGCCGCTGTCTTTGCTGATTGG
TAGTGCTTCGTTATTGCTGCTGCTTGATCCGTTGAGTGTGCTGTCGACGGCATTCTGGCTGTCTTATGGCGCCTGCTTTG
TGCTGTTAAGGATTTACCAGACCCTCCGGCAACAACCGGTGCATCCGCAGCAGACGTTGATGCAAAAATTGTGGCAGGGC
TTCCGGCTGTTATTTGAATCGCAATGGAAAATTTTTATTGCGCTGTTTCCGCTGATGATCATCTTCTTCAAGCAGATTGC
CTGGATTGCGCCGCTGAGTAATCTATTGGCCATTCCCTGGATCGGTCTGGTGACTGTACCGCTGGATATTCTGGCCGGTT
TAAGTTTTTATCTGGCGGAACCGCTGAGCCAGTTGCTGTTTCAGCTCAATGACTTGGCGCTAAGTCTGTTATTGGGTTGT
TTGCAGTTGCTGGATTTGCTGTTTGTGCCGCAACTGATTCCGGTTGCGCTGAGCCCACCGATGCTGCTGAGTCTGGTGCT
GGGACTGATGATTTTATTTCTTCCCGCAGGTCTAGTGCCTAAAGCCTGGTCAGCGCTGTGCTTGTTGCCTTTGCTGTTTC
AGGATCAGTTTTCTCGGCAGGTGGAACTTAGTGTGCTGGATGTTGGGCAAGGGCAGGCGATCTTTTTACGCTATCGTGAA
CACAGTATGATGATTGATATGGGCGGTCATTATGATGAACAGAAATGGAGTATCGGCCGGCAGATTATCCAGCCCTTTTT
AAGTGTCAAAGGCGTGCAGCAGTTAGATTATTTATGGTTGACCCATCTGGATCAGGATCATAGCGGCGCTTATCAGACCT
TAAAGCCACAGTTACAGGTGCAACAGGTCTATGCCAATGCTCAGCTTGAAGTAAATCCTCATAGCCATTTTGACTATTGC
CAGCAAGGACAGCAATGGCAGTGGCAGCCGGGCATCCAGATACAGGTACTCTCTCCGAAACCGGAGCAGTTAAATCCTGT
AGAACAGCAGAAAAATGAAAGTTCCTGTGTGCTGCTGGTCGAGTTTGCACAGGCTCAGCCTTATTCTCGCTTTTTATTGA
TGGGTGATGCAGGCTGGCCGACTGAATATCAGTTATTACAGGATTATCCGGATTTAAAAGCGGATGTGCTGGTGCTTGGC
CATCATGGTAGCCGGCACAGTTCATCTTACCAGTTTTTAAAACAGCTGGAGCCTAAACTGGCAATTGCATCGGCGGGGCT
AAATAACCGTTATGGGCATCCGAGCACACAGGTACAAGCCCGACTGAACGCCTTAAAAATTCCATTATGGCAGACCGTGC
AGCAGGGTAGCATCCAGTTTTATCCCACTGAGAATGAGGTGCTGCCGTACCGGCATACGCGGGTTTGGCTGCTGCGCGAT
TAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (25-176)

• Competence protein (Competence) (234-515)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	47.794	100	0.487
comA/comEC	Acinetobacter baylyi ADP1	47.842	100	0.485
comA/comEC	Acinetobacter baumannii strain A118	47.181	100	0.481