Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   JYG31_RS16760 Genome accession   NZ_CP070976
Coordinates   3243073..3243978 (-) Length   301 a.a.
NCBI ID   WP_213418755.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MBH1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3238073..3248978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYG31_RS16725 (JYG31_16725) - 3238317..3238793 (+) 477 WP_185848675.1 Na+/H+ antiporter subunit E -
  JYG31_RS16730 (JYG31_16730) - 3238793..3239077 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  JYG31_RS16735 (JYG31_16735) mnhG 3239061..3239435 (+) 375 WP_024122678.1 monovalent cation/H(+) antiporter subunit G -
  JYG31_RS16740 (JYG31_16740) - 3239474..3239854 (-) 381 WP_044158943.1 hotdog fold thioesterase -
  JYG31_RS16745 (JYG31_16745) comA 3239872..3240516 (-) 645 WP_101864137.1 two-component system response regulator ComA Regulator
  JYG31_RS16750 (JYG31_16750) comP 3240597..3242906 (-) 2310 WP_213417883.1 two-component system sensor histidine kinase ComP Regulator
  JYG31_RS16755 (JYG31_16755) comX 3242922..3243089 (-) 168 WP_044158946.1 competence pheromone ComX Regulator
  JYG31_RS16760 (JYG31_16760) comQ 3243073..3243978 (-) 906 WP_213418755.1 polyprenyl synthetase family protein Regulator
  JYG31_RS16765 (JYG31_16765) degQ 3244163..3244303 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  JYG31_RS16770 (JYG31_16770) - 3244764..3245132 (+) 369 WP_103671364.1 hypothetical protein -
  JYG31_RS16775 (JYG31_16775) - 3245108..3246337 (-) 1230 WP_044158949.1 EAL and HDOD domain-containing protein -
  JYG31_RS16780 (JYG31_16780) - 3246473..3247942 (-) 1470 WP_024122686.1 nicotinate phosphoribosyltransferase -
  JYG31_RS16785 (JYG31_16785) - 3247958..3248509 (-) 552 WP_213417885.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 301 a.a.        Molecular weight: 34645.99 Da        Isoelectric Point: 7.4314

>NTDB_id=541761 JYG31_RS16760 WP_213418755.1 3243073..3243978(-) (comQ) [Bacillus halotolerans strain MBH1]
MKEIIKQNSFNEDLSQLLYSFIDSKEIFSFAESAILHYVVFGGENLKVATKLGAGIEILILSSDIMDDLEDEDNHQALWM
KMNRSESLNAALFLYTIGLTSIHSMDINPLIFKYVLKYVKDAMQGQHDDITNKSKTEDECLEVIRLKCGSLIALANVTGV
ILATGEYNEIVERYSYYKGIVAQISGDYHVLFSRNRSDIEKNKQTLIYLYLKRVFNEASKELLYLFSNKDLYHKALLNKD
KFAKKLIKAGVTQYVSVLLQIYKQKCFSAIEQLNLYKEKKDLLKKHLLNYKKGDENDARPN

Nucleotide


Download         Length: 906 bp        

>NTDB_id=541761 JYG31_RS16760 WP_213418755.1 3243073..3243978(-) (comQ) [Bacillus halotolerans strain MBH1]
ATGAAAGAAATTATAAAGCAAAACAGTTTTAACGAAGATTTGTCACAGCTTCTTTACTCATTTATCGATTCTAAAGAAAT
ATTCTCCTTTGCTGAATCTGCAATTTTACATTATGTGGTTTTTGGAGGGGAGAATTTAAAGGTTGCAACAAAGCTCGGTG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATCATGGATGATCTTGAAGATGAAGATAATCATCAGGCTTTATGGATG
AAAATGAATCGATCAGAATCCTTAAATGCTGCGCTTTTCTTATATACAATAGGATTAACAAGTATTCATTCCATGGATAT
CAATCCTTTGATTTTTAAATATGTTTTAAAATATGTGAAAGATGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CCAAAACAGAGGATGAGTGTTTAGAGGTAATTAGATTAAAATGTGGGAGCTTGATAGCATTAGCCAATGTAACAGGTGTT
ATATTAGCTACAGGTGAATATAATGAAATAGTCGAAAGATACTCCTATTATAAGGGAATTGTAGCCCAAATTTCTGGAGA
CTATCATGTTCTTTTTTCTAGAAATCGCAGTGATATTGAAAAAAATAAACAAACATTGATTTATTTATATCTTAAACGTG
TATTTAATGAAGCTTCGAAAGAATTATTGTACTTATTTTCAAATAAGGATTTGTATCATAAAGCGTTATTAAATAAGGAT
AAATTCGCAAAAAAGTTAATTAAGGCAGGAGTTACCCAATACGTTTCAGTATTATTGCAAATATATAAGCAAAAATGTTT
TTCTGCTATAGAACAATTAAATTTATATAAAGAGAAAAAAGATTTGTTAAAGAAACATTTATTAAATTATAAAAAGGGTG
ATGAAAATGATGCAAGACCTAATTAA

Domains


Predicted by InterproScan.

(44-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

83.673

97.674

0.817