Detailed information NTG0541168

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: JW980_RS15705
• Genome accession: NZ_CP070866
• Coordinates: 3181832..3183196 (+)
• Length: 454 a.a.
• NCBI ID: WP_373430797.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain XY27
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3176832..3188196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JW980_RS15685 (JW980_15685)	thrC	3177038..3178177 (+)	1140	WP_004692833.1	threonine synthase	-
JW980_RS15690 (JW980_15690)	-	3178263..3179318 (-)	1056	WP_153041792.1	serine hydrolase	-
JW980_RS15695 (JW980_15695)	-	3179534..3180169 (+)	636	WP_004692836.1	response regulator	-
JW980_RS15700 (JW980_15700)	pilS	3180191..3181759 (+)	1569	WP_205667315.1	sensor histidine kinase	Regulator
JW980_RS15705 (JW980_15705)	pilR	3181832..3183196 (+)	1365	WP_373430797.1	sigma-54-dependent transcriptional regulator	Regulator
JW980_RS15710 (JW980_15710)	-	3183201..3184376 (-)	1176	WP_004692840.1	S41 family peptidase	-
JW980_RS15715 (JW980_15715)	gpmI	3184395..3185942 (-)	1548	WP_183174692.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
JW980_RS15720 (JW980_15720)	lptG	3186066..3187136 (-)	1071	WP_058868725.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51056.79 Da
• Isoelectric Point: 6.9739

>NTDB_id=541168 JW980_RS15705 WP_373430797.1 3181832..3183196(+) (pilR) [Acinetobacter johnsonii strain XY27]
MQMSLSRMGIDTRIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLTLVDFIAQNYPNLPVAVLTAYGNMDVAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHKLLIGQSLPIQQLRVTLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGTVGNDQLSHMPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=541168 JW980_RS15705 WP_373430797.1 3181832..3183196(+) (pilR) [Acinetobacter johnsonii strain XY27]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACGTATTGCCTATCGCTTACAGGAGGCTGTTCAAGCACTTAAAAC
ACATCAATATGATGCCTGTCTGACAGATTTGAATTTACCTGATGGTAATGGATTAACGCTGGTGGATTTTATTGCTCAAA
ATTATCCTAATCTACCTGTAGCTGTATTAACTGCTTATGGCAACATGGATGTCGCGATTGCCGCATTAAAAGCGGGTGCT
TTTGATTTTGTCAGTAAACCAATCAACCAAAAGCATTTAGAGCAACTTTTACAAAAGGCCTTTAACCAGCCTATCAGCCA
GCTACATATTCAAGAAGATACGCTTGAACACAAACTGTTAATTGGTCAATCCCTTCCTATTCAACAGCTTCGTGTGACCT
TGAAAAAAATTGCCCGCTCACAGGCCCCTGTCTTTATTACAGGTGAATCAGGAACTGGTAAAGAAGTGGTGGCCAATTTG
GTACATCGCCTGAGTAACCGTAATGAAGGGCCATTTATTGCCATCAACTGTGGTGCTATCCCAACAGAACTGATGGAAAG
TGAACTATTTGGACATCGTAAAGGTAGCTTCACAGGGGCCACTCAAGACAAACAAGGGCTGATTCTCTCTGCACATGGCG
GCAGTTTATTTTTAGATGAAATTGCCGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCCATTGGGAGTGATACCGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACCTAGAAGCACT
GGTACAACAAGGCAAGTTCCGTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCCCTACGTGAGC
GTGGCAATGACATTATTCTTTTGGCACAACATTTCATTCAGAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCATTG
AGTGAACGTGCACGTGAATTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAATTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCGCACTTGCAAACAGCCCCACTGCGACCAATTGCTCAGACCAACT
ATGCCAATGCCACGCAACAAGGTACTGTTGGCAATGATCAACTCAGTCATATGCCTTCGCGTAAATTACCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTTACCCACTGGAACCGAACACTGGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGGCTAGATGGCGAAGACGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Response regulator receiver domain (Response_reg) (4-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.449	100	0.744
pilR	Pseudomonas aeruginosa PAK	48.78	99.339	0.485