Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   JOW61_RS20015 Genome accession   NZ_CP070844
Coordinates   3732271..3732390 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. natto strain BN0     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3727271..3737390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOW61_RS19995 (JOW61_19845) albG 3727435..3728136 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  JOW61_RS20000 (JOW61_19850) ywhL 3728142..3729518 (-) 1377 WP_014481223.1 YncE family protein -
  JOW61_RS20005 (JOW61_19855) ywhK 3729557..3730912 (-) 1356 WP_014481224.1 YncE family protein -
  JOW61_RS22560 - 3730909..3731139 (-) 231 Protein_3886 hypothetical protein -
  JOW61_RS20010 (JOW61_19860) rapF 3731142..3732287 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  JOW61_RS20015 (JOW61_19865) phrF 3732271..3732390 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  JOW61_RS20020 (JOW61_19870) - 3732488..3732915 (+) 428 Protein_3889 YbaK/EbsC family protein -
  JOW61_RS20025 (JOW61_19875) speB 3732980..3733852 (-) 873 WP_003227545.1 agmatinase -
  JOW61_RS20030 (JOW61_19880) speE 3733913..3734743 (-) 831 WP_003227543.1 spermidine synthase -
  JOW61_RS20035 (JOW61_19885) pbpG 3734945..3737020 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=541036 JOW61_RS20015 WP_009968329.1 3732271..3732390(+) (phrF) [Bacillus subtilis subsp. natto strain BN0]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=541036 JOW61_RS20015 WP_009968329.1 3732271..3732390(+) (phrF) [Bacillus subtilis subsp. natto strain BN0]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487