Detailed information NTG0541035

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JOW61_RS20010
• Genome accession: NZ_CP070844
• Coordinates: 3731142..3732287 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain BN0
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3726142..3737287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JOW61_RS19990 (JOW61_19840)	albF	3726158..3727438 (+)	1281	WP_014481221.1	pitrilysin family protein	-
JOW61_RS19995 (JOW61_19845)	albG	3727435..3728136 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
JOW61_RS20000 (JOW61_19850)	ywhL	3728142..3729518 (-)	1377	WP_014481223.1	YncE family protein	-
JOW61_RS20005 (JOW61_19855)	ywhK	3729557..3730912 (-)	1356	WP_014481224.1	YncE family protein	-
JOW61_RS22560	-	3730909..3731139 (-)	231	Protein_3886	hypothetical protein	-
JOW61_RS20010 (JOW61_19860)	rapF	3731142..3732287 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
JOW61_RS20015 (JOW61_19865)	phrF	3732271..3732390 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
JOW61_RS20020 (JOW61_19870)	-	3732488..3732915 (+)	428	Protein_3889	YbaK/EbsC family protein	-
JOW61_RS20025 (JOW61_19875)	speB	3732980..3733852 (-)	873	WP_003227545.1	agmatinase	-
JOW61_RS20030 (JOW61_19880)	speE	3733913..3734743 (-)	831	WP_003227543.1	spermidine synthase	-
JOW61_RS20035 (JOW61_19885)	pbpG	3734945..3737020 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=541035 JOW61_RS20010 WP_014481226.1 3731142..3732287(+) (rapF) [Bacillus subtilis subsp. natto strain BN0]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=541035 JOW61_RS20010 WP_014481226.1 3731142..3732287(+) (rapF) [Bacillus subtilis subsp. natto strain BN0]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572