Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6J48_RS12395 Genome accession   NZ_CP070518
Coordinates   2611749..2612132 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter calcoaceticus strain FDAARGOS_1218     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2606749..2617132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J48_RS12385 (I6J48_12385) - 2609647..2610756 (-) 1110 WP_132071754.1 efflux RND transporter periplasmic adaptor subunit -
  I6J48_RS12390 (I6J48_12390) - 2610825..2611463 (-) 639 WP_205468573.1 hypothetical protein -
  I6J48_RS12395 (I6J48_12395) pilG 2611749..2612132 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  I6J48_RS12400 (I6J48_12400) - 2612156..2612518 (+) 363 WP_005036319.1 PleD family two-component system response regulator -
  I6J48_RS12405 (I6J48_12405) - 2612578..2613114 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  I6J48_RS12410 (I6J48_12410) - 2613157..2615238 (+) 2082 WP_017392491.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=540504 I6J48_RS12395 WP_000389061.1 2611749..2612132(+) (pilG) [Acinetobacter calcoaceticus strain FDAARGOS_1218]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=540504 I6J48_RS12395 WP_000389061.1 2611749..2612132(+) (pilG) [Acinetobacter calcoaceticus strain FDAARGOS_1218]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTAATTGATGACTCAAAAACCATTCGCCGTACAGCCGAAACTTTATT
ACAGCGAGAAGGCTGTGAAGTGATTACTGCGGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGCGCTTTGATTAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCACGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37