Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | JTI59_RS07560 | Genome accession | NZ_CP070511 |
| Coordinates | 1489815..1490861 (+) | Length | 348 a.a. |
| NCBI ID | WP_089097914.1 | Uniprot ID | A0A226QL34 |
| Organism | Parageobacillus toebii strain NEB718 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1484815..1495861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JTI59_RS07535 (JTI59_07535) | - | 1485848..1486024 (-) | 177 | WP_015864488.1 | DUF2759 domain-containing protein | - |
| JTI59_RS07540 (JTI59_07540) | - | 1486385..1487017 (+) | 633 | WP_015864487.1 | MBL fold metallo-hydrolase | - |
| JTI59_RS07545 (JTI59_07545) | - | 1487307..1488440 (+) | 1134 | WP_420830752.1 | class I SAM-dependent methyltransferase | - |
| JTI59_RS07550 (JTI59_07550) | - | 1488489..1488731 (-) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| JTI59_RS07555 (JTI59_07555) | - | 1488916..1489614 (-) | 699 | WP_205424573.1 | helix-turn-helix transcriptional regulator | - |
| JTI59_RS07560 (JTI59_07560) | comGA | 1489815..1490861 (+) | 1047 | WP_089097914.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JTI59_RS07565 (JTI59_07565) | comGB | 1490954..1491979 (+) | 1026 | WP_097354745.1 | competence type IV pilus assembly protein ComGB | - |
| JTI59_RS07570 (JTI59_07570) | comGC | 1491994..1492290 (+) | 297 | WP_015864482.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JTI59_RS07575 (JTI59_07575) | comGD | 1492274..1492717 (+) | 444 | WP_015864481.1 | competence type IV pilus minor pilin ComGD | - |
| JTI59_RS07580 (JTI59_07580) | comGE | 1492701..1493024 (+) | 324 | WP_015864480.1 | competence type IV pilus minor pilin ComGE | - |
| JTI59_RS07585 (JTI59_07585) | comGF | 1493021..1493443 (+) | 423 | WP_015864479.1 | competence type IV pilus minor pilin ComGF | - |
| JTI59_RS07590 (JTI59_07590) | comGG | 1493460..1493846 (+) | 387 | WP_015864478.1 | competence type IV pilus minor pilin ComGG | - |
| JTI59_RS07595 (JTI59_07595) | - | 1494041..1494220 (+) | 180 | WP_015864477.1 | YqzE family protein | - |
| JTI59_RS07600 (JTI59_07600) | - | 1494281..1495072 (-) | 792 | WP_015864476.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 39590.13 Da Isoelectric Point: 9.0889
>NTDB_id=540419 JTI59_RS07560 WP_089097914.1 1489815..1490861(+) (comGA) [Parageobacillus toebii strain NEB718]
MNEIEYVADRLIKEASLLHVSDIHIVPRKDDAIVRFRLDGLLMEKEALTKEMCERLITHFKFLAGMDIGERRRPQSGAME
ARHQEEIIHLRLSTLPTSYDESLVIRLLPQNFFIPRSQLSLFANATKTLLSLFRQPQGLIIFTGPTGSGKTSTLYTLLRI
CQYEWHRNVITLEDPVEKRIDNILQVQINEKAGITYTTGLKAVLRHDPDVIMIGEIRDAETAKIAVRSAMTGHLIATTMH
TKNAVGAIYRLREFGIPLGDIEQTLLAVVAQRLVDLVCPFCGEHCSIFCRKYRSIRRAAVHELLYGNALSNAIQSVQTKE
KTHHYYTLQHVIRKGVALGFLPAHLLYR
MNEIEYVADRLIKEASLLHVSDIHIVPRKDDAIVRFRLDGLLMEKEALTKEMCERLITHFKFLAGMDIGERRRPQSGAME
ARHQEEIIHLRLSTLPTSYDESLVIRLLPQNFFIPRSQLSLFANATKTLLSLFRQPQGLIIFTGPTGSGKTSTLYTLLRI
CQYEWHRNVITLEDPVEKRIDNILQVQINEKAGITYTTGLKAVLRHDPDVIMIGEIRDAETAKIAVRSAMTGHLIATTMH
TKNAVGAIYRLREFGIPLGDIEQTLLAVVAQRLVDLVCPFCGEHCSIFCRKYRSIRRAAVHELLYGNALSNAIQSVQTKE
KTHHYYTLQHVIRKGVALGFLPAHLLYR
Nucleotide
Download Length: 1047 bp
>NTDB_id=540419 JTI59_RS07560 WP_089097914.1 1489815..1490861(+) (comGA) [Parageobacillus toebii strain NEB718]
ATGAATGAAATTGAATATGTTGCCGATCGTCTCATAAAAGAAGCGAGTTTGCTTCATGTATCTGACATTCATATCGTTCC
GCGCAAAGACGATGCGATTGTGCGTTTCCGGTTAGATGGATTGCTGATGGAAAAGGAAGCGCTGACAAAAGAAATGTGCG
AGCGGCTTATTACGCATTTTAAATTTTTAGCAGGGATGGACATTGGCGAACGCCGCCGTCCGCAAAGCGGAGCGATGGAA
GCAAGGCATCAGGAAGAAATCATTCACTTACGTCTCTCCACATTACCGACATCGTATGATGAAAGCCTCGTTATCCGGCT
TCTTCCGCAGAATTTTTTTATTCCTCGATCACAACTTTCTCTATTTGCAAATGCCACGAAAACGTTACTTTCCCTTTTTC
GGCAGCCCCAAGGATTAATTATTTTTACAGGACCAACTGGATCAGGCAAAACATCAACATTATATACGTTATTGCGCATT
TGCCAATATGAGTGGCATCGCAATGTCATCACATTGGAAGACCCTGTTGAAAAGCGAATCGACAACATATTGCAAGTGCA
AATTAATGAGAAAGCGGGAATTACGTATACAACCGGTTTAAAAGCTGTTTTGCGCCATGATCCGGATGTGATTATGATCG
GCGAAATTCGCGACGCCGAGACCGCAAAAATTGCGGTACGCTCAGCAATGACGGGACATTTGATTGCTACGACCATGCAT
ACAAAAAACGCTGTTGGTGCGATTTACCGTTTGCGTGAATTCGGGATTCCGCTTGGAGATATTGAGCAAACATTGCTCGC
CGTTGTCGCACAGCGGCTCGTGGACTTAGTATGCCCGTTTTGCGGTGAACATTGCTCCATATTTTGCCGTAAATATCGCT
CCATTCGCCGCGCTGCTGTCCATGAACTGCTGTATGGGAATGCTTTGTCGAACGCCATTCAATCCGTACAAACAAAGGAA
AAGACGCATCACTACTATACGTTGCAACACGTTATTCGAAAAGGAGTTGCTCTTGGATTTTTGCCAGCACACCTTCTTTA
CAGGTAG
ATGAATGAAATTGAATATGTTGCCGATCGTCTCATAAAAGAAGCGAGTTTGCTTCATGTATCTGACATTCATATCGTTCC
GCGCAAAGACGATGCGATTGTGCGTTTCCGGTTAGATGGATTGCTGATGGAAAAGGAAGCGCTGACAAAAGAAATGTGCG
AGCGGCTTATTACGCATTTTAAATTTTTAGCAGGGATGGACATTGGCGAACGCCGCCGTCCGCAAAGCGGAGCGATGGAA
GCAAGGCATCAGGAAGAAATCATTCACTTACGTCTCTCCACATTACCGACATCGTATGATGAAAGCCTCGTTATCCGGCT
TCTTCCGCAGAATTTTTTTATTCCTCGATCACAACTTTCTCTATTTGCAAATGCCACGAAAACGTTACTTTCCCTTTTTC
GGCAGCCCCAAGGATTAATTATTTTTACAGGACCAACTGGATCAGGCAAAACATCAACATTATATACGTTATTGCGCATT
TGCCAATATGAGTGGCATCGCAATGTCATCACATTGGAAGACCCTGTTGAAAAGCGAATCGACAACATATTGCAAGTGCA
AATTAATGAGAAAGCGGGAATTACGTATACAACCGGTTTAAAAGCTGTTTTGCGCCATGATCCGGATGTGATTATGATCG
GCGAAATTCGCGACGCCGAGACCGCAAAAATTGCGGTACGCTCAGCAATGACGGGACATTTGATTGCTACGACCATGCAT
ACAAAAAACGCTGTTGGTGCGATTTACCGTTTGCGTGAATTCGGGATTCCGCTTGGAGATATTGAGCAAACATTGCTCGC
CGTTGTCGCACAGCGGCTCGTGGACTTAGTATGCCCGTTTTGCGGTGAACATTGCTCCATATTTTGCCGTAAATATCGCT
CCATTCGCCGCGCTGCTGTCCATGAACTGCTGTATGGGAATGCTTTGTCGAACGCCATTCAATCCGTACAAACAAAGGAA
AAGACGCATCACTACTATACGTTGCAACACGTTATTCGAAAAGGAGTTGCTCTTGGATTTTTGCCAGCACACCTTCTTTA
CAGGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.726 |
98.563 |
0.569 |
| pilB | Glaesserella parasuis strain SC1401 |
42.157 |
87.931 |
0.371 |
| pilF | Thermus thermophilus HB27 |
42.568 |
85.057 |
0.362 |