Detailed information NTG0540198

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: JWZ98_RS03750
• Genome accession: NZ_CP070494
• Coordinates: 800901..802241 (+)
• Length: 446 a.a.
• NCBI ID: WP_205453340.1
• Uniprot ID: -
• Organism: Methylomonas sp. EFPC1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 795901..807241

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWZ98_RS03735 (JWZ98_03735)	sucD	797140..798015 (-)	876	WP_205453337.1	succinate--CoA ligase subunit alpha	-
JWZ98_RS03740 (JWZ98_03740)	sucC	798015..799184 (-)	1170	WP_205453338.1	ADP-forming succinate--CoA ligase subunit beta	-
JWZ98_RS03745 (JWZ98_03745)	-	799360..800904 (+)	1545	WP_240348203.1	ATP-binding protein	-
JWZ98_RS03750 (JWZ98_03750)	pilR	800901..802241 (+)	1341	WP_205453340.1	sigma-54 dependent transcriptional regulator	Regulator
JWZ98_RS03755 (JWZ98_03755)	-	802301..802789 (-)	489	WP_205453341.1	hypothetical protein	-
JWZ98_RS03760 (JWZ98_03760)	-	802941..804776 (-)	1836	WP_205453342.1	GGDEF and EAL domain-containing protein	-
JWZ98_RS03765 (JWZ98_03765)	-	804955..805806 (+)	852	WP_205453343.1	HDOD domain-containing protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49221.95 Da
• Isoelectric Point: 5.8585

>NTDB_id=540198 JWZ98_RS03750 WP_205453340.1 800901..802241(+) (pilR) [Methylomonas sp. EFPC1]
MNMPVTLVVDDEPDIRELLEITLNRMHIQTRCAANLAEAKQLLAVEVFDLCLTDMKLPDGDGLDLVDHIQLAGLQLPVAV
ITAHGSMDIAIKAMKKGAFDFLSKPVDLGVLRQLVSHALQASLTRVSDKERRTRDILLGESALMCAIRSKIDKVARNQAP
VYISGESGSGKELVARLIHQQSPRGEKPFIAINCGAIPPELMESEFFGHKKGSFTGAVADKQGLFQAADGGTLFLDEVAD
LPLPLQVKLLRAIQEKKVRPVGEQREVPVDVRLLSATHKDLTKMVQEGSFRQDLYYRINVIELSLPPLRARSADIPQLTQ
HLLAGLANANGMDLPKLSDSALNALKHYYFPGNVRELENILERALALHDGGVIEADDLNLPLGMELAAVEDFDAEKMSLE
AYLEDIEKKALSAALEENRWNKTATAKYLGLSFRSLRYRLKKLGLE

Nucleotide

• Length: 1341 bp

>NTDB_id=540198 JWZ98_RS03750 WP_205453340.1 800901..802241(+) (pilR) [Methylomonas sp. EFPC1]
ATGAATATGCCTGTCACCCTGGTTGTCGACGACGAACCCGACATCCGAGAATTACTCGAAATAACCCTGAACCGCATGCA
CATTCAAACCCGTTGCGCGGCCAATTTGGCCGAGGCCAAACAGCTACTGGCCGTTGAGGTGTTTGATTTGTGTCTTACCG
ATATGAAACTACCGGACGGCGACGGGCTAGACTTGGTCGATCATATTCAATTGGCCGGTTTGCAATTGCCGGTGGCGGTG
ATTACTGCGCATGGCAGCATGGATATTGCGATCAAAGCCATGAAAAAAGGCGCCTTCGATTTCCTGTCTAAGCCGGTCGA
TTTGGGGGTATTGCGGCAACTAGTCAGTCATGCGCTGCAAGCCTCGCTAACTAGGGTTTCCGACAAGGAGCGACGTACCC
GCGACATCTTGTTGGGTGAGTCTGCATTAATGTGCGCTATTCGCTCGAAGATCGACAAGGTGGCGCGCAACCAGGCGCCG
GTTTATATCAGCGGAGAGTCCGGTTCGGGCAAGGAGTTGGTGGCCAGATTGATACACCAGCAAAGCCCGCGCGGCGAGAA
ACCGTTTATTGCGATTAACTGCGGAGCGATTCCGCCTGAATTGATGGAAAGCGAATTCTTCGGGCATAAAAAAGGCAGTT
TCACCGGCGCGGTAGCCGACAAGCAAGGCTTGTTTCAGGCGGCCGATGGCGGTACCTTGTTTTTGGATGAAGTGGCTGAT
TTGCCTTTGCCCTTGCAAGTTAAATTGTTGCGGGCGATTCAGGAGAAAAAAGTCCGCCCGGTCGGCGAACAGCGGGAAGT
GCCTGTCGATGTGCGCTTATTGAGTGCAACCCACAAGGATTTGACCAAGATGGTCCAAGAAGGCAGTTTTAGGCAGGATT
TGTACTACCGGATCAATGTCATCGAGCTGAGTTTGCCACCCCTGCGCGCCCGGTCCGCCGATATTCCTCAGCTTACCCAG
CACTTATTGGCGGGCTTGGCTAATGCCAACGGCATGGATTTGCCCAAACTCAGCGACTCTGCGCTAAATGCGTTAAAGCA
CTACTATTTTCCCGGCAATGTTCGGGAGCTGGAAAATATATTGGAGCGGGCGCTGGCCTTGCACGATGGCGGCGTGATTG
AAGCCGACGATCTGAACTTGCCGTTGGGGATGGAATTGGCCGCGGTCGAAGATTTTGACGCCGAGAAAATGTCGTTGGAA
GCCTATCTCGAGGACATAGAGAAAAAAGCCTTGAGTGCGGCGCTGGAAGAAAATCGTTGGAACAAAACCGCTACCGCTAA
ATACTTGGGCCTAAGCTTCCGTTCGCTGCGGTATCGCTTGAAAAAGTTGGGTCTTGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-303)

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.193	100	0.639
pilR	Acinetobacter baumannii strain A118	49.676	100	0.516
luxO	Vibrio cholerae strain A1552	39.367	99.103	0.39