Detailed information NTG0540198

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: LL045_RS08470
• Genome accession: NZ_CP086083
• Coordinates: 1752548..1753546 (-)
• Length: 332 a.a.
• NCBI ID: WP_003129447.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain EIP20A
• Function: repress the expression of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1747548..1758546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL045_RS08450 (LL045_08435)	trxA	1747938..1748252 (-)	315	WP_003129442.1	thioredoxin	-
LL045_RS08455 (LL045_08440)	mutS/mutS2	1748349..1750679 (-)	2331	WP_394530049.1	endonuclease MutS2	Machinery gene
LL045_RS08460 (LL045_08445)	-	1750724..1751284 (-)	561	WP_003129445.1	CvpA family protein	-
LL045_RS08465 (LL045_08450)	-	1751444..1752409 (-)	966	WP_038601594.1	NAD(P)/FAD-dependent oxidoreductase	-
LL045_RS08470 (LL045_08455)	ccpA	1752548..1753546 (-)	999	WP_003129447.1	catabolite control protein A	Regulator
LL045_RS08475 (LL045_08460)	-	1753761..1754849 (+)	1089	WP_003129448.1	Xaa-Pro peptidase family protein	-
LL045_RS08480 (LL045_08465)	-	1755170..1757173 (-)	2004	WP_394530051.1	cell division site-positioning protein MapZ family protein	-
LL045_RS08485 (LL045_08470)	-	1757321..1758475 (-)	1155	WP_058205404.1	class I SAM-dependent RNA methyltransferase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36602.71 Da
• Isoelectric Point: 4.9196

>NTDB_id=540198 LL045_RS08470 WP_003129447.1 1752548..1753546(-) (ccpA) [Lactococcus lactis subsp. lactis strain EIP20A]
MVESTTTIYDVARVAGVSMATVSRVVNGNANVKEKTRQKVLEAIAELDYRPNAVARGLASKRTTTVGVILPTITSTYFAA
ITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKNSRTPVVLVGTIDGDKEIPSV
NIDYHLAAYQSTKKLIDSGNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNYSYEQGKALAERLLERGA
TSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLV
LDHEIFSRRSTK

Nucleotide

• Length: 999 bp

>NTDB_id=540198 LL045_RS08470 WP_003129447.1 1752548..1753546(-) (ccpA) [Lactococcus lactis subsp. lactis strain EIP20A]
ATGGTAGAATCAACAACAACAATTTATGATGTGGCACGTGTCGCCGGAGTGTCAATGGCAACCGTTAGTCGTGTTGTAAA
TGGAAATGCAAATGTAAAGGAAAAGACGCGCCAGAAGGTCTTAGAAGCTATTGCTGAGCTTGACTATCGTCCTAATGCAG
TTGCGCGCGGACTCGCAAGTAAACGTACAACAACAGTTGGTGTTATCTTGCCAACCATCACTTCAACTTACTTCGCAGCG
ATTACTCGCGGGGTTGATGATATCGCTTCCATGTATAAATACAACATGATTTTAGCTAATAGTGATAATGATGTTGAAAA
AGAAGAAAAAGTTTTAGAAACTTTCTTATCAAAACAAGTTGACGGAATCGTCTATATGGGTTCATCTTTAGATGAAAAAA
TTAGAACTTCCCTCAAAAATTCAAGAACACCTGTCGTTTTAGTTGGAACAATCGATGGAGATAAAGAAATTCCATCTGTT
AATATTGATTACCATTTGGCTGCTTATCAATCAACTAAAAAATTGATTGATAGCGGAAATAAAAAAATCGCTTATATCAT
GGGTTCATTGAAAGACGTTGAAAATACAGAACGCATGGTTGGTTATCAAGAAGCTTTGCTTGAAGCAAATATTGAATTTG
ATGAAAACCTCGTTTTTGAAGGTAATTATAGCTATGAACAAGGAAAAGCACTTGCTGAACGTTTACTTGAGCGAGGAGCA
ACTTCTGCAGTAGTATCACATGATACAGTAGCCGTTGGACTCTTGTCTGCAATGATGGATAAAGGAGTGAAAGTTCCTGA
AGATTTCGAAATTATCTCAGGTGCAAATTCACCAATTACTCAATATACATATCCAACTTTAACTTCTGTTAACCAACCCC
TTTACGATTTGGGAGCAGTAGCAATGCGTCTTTTGACAAAATTAATGCTTAAAGAAGATGTTGAACAAAATCAATTAGTT
TTGGATCATGAAATCTTTTCTCGTCGTTCTACCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

• Periplasmic binding protein-like domain (Peripla_BP_3) (173-331)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	100	100	1
ccpA	Streptococcus pneumoniae D39	57.402	99.699	0.572
ccpA	Streptococcus gordonii str. Challis substr. CH1	57.1	99.699	0.569