Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   GGS_RS02745 Genome accession   NC_018712
Coordinates   530595..531596 (+) Length   333 a.a.
NCBI ID   WP_003049927.1    Uniprot ID   A0A9X5LWR8
Organism   Streptococcus dysgalactiae subsp. equisimilis RE378     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 525595..536596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GGS_RS02720 (GGS_0516) - 525646..526572 (-) 927 WP_003053920.1 glycosyltransferase family 2 protein -
  GGS_RS02725 (GGS_0517) - 526709..527894 (-) 1186 Protein_500 DNA/RNA non-specific endonuclease -
  GGS_RS02730 (GGS_0518) - 528240..528617 (-) 378 WP_003049924.1 VOC family protein -
  GGS_RS02735 (GGS_0519) - 528627..529292 (-) 666 WP_003058626.1 NAD(P)H-dependent oxidoreductase -
  GGS_RS02740 (GGS_0520) - 529336..530421 (-) 1086 WP_003058632.1 Xaa-Pro peptidase family protein -
  GGS_RS02745 (GGS_0521) ccpA 530595..531596 (+) 1002 WP_003049927.1 catabolite control protein A Regulator
  GGS_RS02750 (GGS_0522) - 531750..533213 (+) 1464 WP_015016772.1 alpha-amylase -
  GGS_RS02755 (GGS_0523) - 533290..534289 (+) 1000 Protein_506 glycosyltransferase -
  GGS_RS02760 (GGS_0524) - 534291..535625 (+) 1335 WP_003062487.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36683.74 Da        Isoelectric Point: 5.7248

>NTDB_id=53954 GGS_RS02745 WP_003049927.1 530595..531596(+) (ccpA) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHQSIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=53954 GGS_RS02745 WP_003049927.1 530595..531596(+) (ccpA) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGAATACAGATGATACCATCACGATTTATGACGTTGCCCGTGAAGCTGGTGTTTCTATGGCAACTGTTAGTCGTGTTGT
TAATGGCAATAAAAACGTTAAGGAAAACACGCGTAAGAAAGTTTTAGAAGTCATTGACCGCCTAGATTATCGTCCAAATG
CTGTCGCACGTGGTCTCGCCAGCAAAAAAACAACAACCGTCGGGGTTGTGATTCCGAATATTGCAAACAGTTATTTTTCT
ATTTTAGCCAAAGGTATTGATGATATCGCCGCTATGTATAAATATAATATTGTACTTGCCTCTAGTGATGAGGATGATGA
CAAGGAGGTTAACGTTGTTAATACCCTCTTTGCTAAGCAAGTTGACGGTATTATCTTTATGGGGCACCACTTGACTGAAA
AAATCCGTGCGGAATTTTCACGCTCACGCACCCCGATTGTTTTAGCAGGGACAGTTGACCTTGATCATCAATTACCAAGT
GTTAATATTGACTATAAGGCAGCTGTGTCTAATGTGGTTGATATTTTGGCAGAAAACCATCAGAGCATTGCCTTTGTGTC
AGGACCACTTATTGATGACATCAATGGTAAAGTACGTTTGGCAGGTTACAAAGAAGGCTTGAAGCACAACAAACTTGACT
TCAAAGAAGGACTTGTTTTTGAAGCTAACTATTCTTATAAAGAAGGTTTTGAATTGGCACAACGTGTGATTAACTCAGGA
GCAACAGCAGCTTATGTGGCTGAAGATGAGTTAGCAGCGGGTCTTTTAAATGGTTTGTTTGAAGCAGGCAAACGCGTTCC
AGAAGATTTTGAAATCATCACAAGCAATGATTCACCAGTTGTTCAATATACCCGTCCAAACTTGAGTTCTATCAGCCAAC
CCGTTTACGACTTGGGAGCTGTCAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGCGGAACCACTAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553

Multiple sequence alignment