Detailed information NTG0053947

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: GGS_RS01810
• Genome accession: NC_018712
• Coordinates: 354745..355671 (+)
• Length: 308 a.a.
• NCBI ID: WP_003049687.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis RE378
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 349745..360671

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GGS_RS01800 (GGS_0342)	amiA	351207..353177 (+)	1971	WP_042357846.1	peptide ABC transporter substrate-binding protein	Regulator
GGS_RS01805 (GGS_0343)	amiC	353243..354745 (+)	1503	WP_003057826.1	ABC transporter permease	Regulator
GGS_RS01810 (GGS_0344)	amiD	354745..355671 (+)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
GGS_RS01815 (GGS_0345)	amiE	355680..356750 (+)	1071	WP_003060269.1	ABC transporter ATP-binding protein	Regulator
GGS_RS01820 (GGS_0346)	amiF	356743..357666 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator
GGS_RS01825 (GGS_0347)	-	357694..358678 (-)	985	Protein_325	IS30 family transposase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34888.93 Da
• Isoelectric Point: 9.2024

>NTDB_id=53947 GGS_RS01810 WP_003049687.1 354745..355671(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis RE378]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=53947 GGS_RS01810 WP_003049687.1 354745..355671(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTGACCATCT
TATTGATGAGTTTTATTTACCCAATGTTTGCGAATTATGACTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TATATTTGGCCCAACGCCGAATACTGGTTTGGAACAGATAAAAACGGACAATCTTTGTTTGATGGTGTTTGGTATGGAGC
GCGTAATTCTATCTTAATTTCTGTTATAGCAACATTGATTAATGTGACTATCGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTATAATGTCATCTCAAACATTCCTTCAATGTTAATTATCATTGTT
TTGACCTATTCATTAGGTGCTGGTTTTTGGAATTTGATTTTAGCTTTCTGTATCACTGGATGGATCGGTGTAGCTTACTC
TATCCGTGTGCAAATCTTACGTTACCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAGAACCTCTTGCCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACGACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
TAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTAACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCCAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.052	100	0.731
amiD	Streptococcus thermophilus LMG 18311	73.052	100	0.731
amiD	Streptococcus thermophilus LMD-9	73.052	100	0.731