Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   JVX94_RS18950 Genome accession   NZ_CP070345
Coordinates   3725867..3728179 (+) Length   770 a.a.
NCBI ID   WP_095409465.1    Uniprot ID   -
Organism   Bacillus sp. PDNC022     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3720867..3733179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVX94_RS18925 (JVX94_18925) - 3722318..3723544 (+) 1227 WP_095409469.1 HDOD domain-containing protein -
  JVX94_RS18930 (JVX94_18930) - 3723578..3723934 (-) 357 WP_205184124.1 inner spore coat protein -
  JVX94_RS18935 (JVX94_18935) degQ 3724440..3724580 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  JVX94_RS18940 (JVX94_18940) - 3724732..3725646 (+) 915 WP_095409467.1 polyprenyl synthetase family protein -
  JVX94_RS18945 (JVX94_18945) comX 3725643..3725813 (+) 171 WP_189310220.1 competence pheromone ComX -
  JVX94_RS18950 (JVX94_18950) comP 3725867..3728179 (+) 2313 WP_095409465.1 ATP-binding protein Regulator
  JVX94_RS18955 (JVX94_18955) comA 3728260..3728901 (+) 642 WP_095409464.1 response regulator transcription factor Regulator
  JVX94_RS18960 (JVX94_18960) - 3728925..3729314 (+) 390 WP_095409463.1 hotdog fold thioesterase -
  JVX94_RS18965 (JVX94_18965) mnhG 3729419..3729793 (-) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  JVX94_RS18970 (JVX94_18970) - 3729777..3730058 (-) 282 WP_039181117.1 Na(+)/H(+) antiporter subunit F1 -
  JVX94_RS18975 (JVX94_18975) - 3730058..3730537 (-) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  JVX94_RS18980 (JVX94_18980) - 3730544..3732022 (-) 1479 WP_095409462.1 Na+/H+ antiporter subunit D -
  JVX94_RS18985 (JVX94_18985) - 3732015..3732356 (-) 342 WP_048237322.1 Na(+)/H(+) antiporter subunit C -
  JVX94_RS18990 (JVX94_18990) - 3732356..3732787 (-) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89510.01 Da        Isoelectric Point: 7.3482

>NTDB_id=539321 JVX94_RS18950 WP_095409465.1 3725867..3728179(+) (comP) [Bacillus sp. PDNC022]
MKITYTKLSAFLVFLSFLFLIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEAQRKSAFLLVVFLLTICIGY
LSAGTSGIGERFSHYVITFCLSSVFVFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTVFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFIICCLSNIQTPKLSRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQRESNPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLVSWNDQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=539321 JVX94_RS18950 WP_095409465.1 3725867..3728179(+) (comP) [Bacillus sp. PDNC022]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTCTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAGTATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCCCAACGAAAATCAGCATTTCTTTTAGTTGTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAAAGATTTAGCCATTATGTAATTACATTTTGTTTATCAAGTGTATTTGTCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCAAAAAACAATTCGCTTTTTATATA
GTCTTCCTATAATTAATCTAGTAATAGAGTTATTTGTTCCGATTGATTCGGCGATAGCCAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAATATCATAGCATTTTGTCCATTTATCTTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTGGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTTATGACGAACAAGCTTTACAATATGGATTTTTTGATAAGCAGACTGAAATACTATGGGTTTCTTGCCATTACACCGAC
CGTTTTTGTTGTTGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACCT
ATACACTCATGCTGGCTGTATTCTATTTCAAAGAAATTCTAGATTTCCGCTTCCGTCTGAAGCGTTTTTCAGAAAAGCAT
AATTACCAGGACAGTGTGTTTAAATTCACGCAGCTCATTCGTGAGGCGTCCTCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTGAATAAAGCCTTTGTGCTTGAGGTGAAAGCTGACGGACAAATTATTGAAATTG
ATGAATCGACAAATGATAGTAAGCTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTCGGGAAAATT
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAACGGGGCGGTCACTCGTTTATCATTTGCTGCTTATCCAATAT
ACAGACACCGAAATTGTCGCGTGATGAGATTTCTTGGTTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAATTGATGGAGCATCTTGACGATTTGAAACAGCGCGAGTCCAATCCTGCCTGGCTGAAGAAAATC
ATGTTTGCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGACTTGATATCCCT
AAAAAGGCAGTCAGAGATGTTTTTAACGAATTTCCAAAACAACCAATGCCCAACATCCATTGAAAATTCGCTTGTCTCAT
GGAACGATCAAATGTCTAAAGTGATTCAGACGACGAGAGAAACGTGTCATGAGCTTCGGCCGCAGCTGCTGTATGATTTA
GGTTTAGTAAAGGCGATATCGAAGCTGACTTCTCAAATTCAAGAGGAAGCACCGTTTCATATAAGGCTGAATACGACACG
CTTTGATAAAGAGCTGGACATTGATATTGATTCACAGCTGAATATTTACCGAATTGTCCAGGAGCTGTTATCCAATGCCC
TGAAGCACTCCCAAGCCACCCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGAGTCGGTTTTGATGCAAGTCATCTTGATCAGCACACAATGAGCATGGGGCTATCGGGAATTAGGGAACGAGTCAAAGC
GTTAAATGGAAAGCTTCAAATTCACACAGCACCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.774

100

0.491