Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   JVX94_RS18935 Genome accession   NZ_CP070345
Coordinates   3724440..3724580 (+) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus sp. PDNC022     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3719440..3729580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVX94_RS18910 (JVX94_18910) - 3719671..3720078 (+) 408 WP_203128794.1 YueI family protein -
  JVX94_RS18915 (JVX94_18915) - 3720139..3720690 (+) 552 WP_095409470.1 isochorismatase family cysteine hydrolase -
  JVX94_RS18920 (JVX94_18920) - 3720708..3722180 (+) 1473 WP_203128793.1 nicotinate phosphoribosyltransferase -
  JVX94_RS18925 (JVX94_18925) - 3722318..3723544 (+) 1227 WP_095409469.1 HDOD domain-containing protein -
  JVX94_RS18930 (JVX94_18930) - 3723578..3723934 (-) 357 WP_205184124.1 inner spore coat protein -
  JVX94_RS18935 (JVX94_18935) degQ 3724440..3724580 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  JVX94_RS18940 (JVX94_18940) - 3724732..3725646 (+) 915 WP_095409467.1 polyprenyl synthetase family protein -
  JVX94_RS18945 (JVX94_18945) comX 3725643..3725813 (+) 171 WP_189310220.1 competence pheromone ComX -
  JVX94_RS18950 (JVX94_18950) comP 3725867..3728179 (+) 2313 WP_095409465.1 ATP-binding protein Regulator
  JVX94_RS18955 (JVX94_18955) comA 3728260..3728901 (+) 642 WP_095409464.1 response regulator transcription factor Regulator
  JVX94_RS18960 (JVX94_18960) - 3728925..3729314 (+) 390 WP_095409463.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=539320 JVX94_RS18935 WP_003213123.1 3724440..3724580(+) (degQ) [Bacillus sp. PDNC022]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=539320 JVX94_RS18935 WP_003213123.1 3724440..3724580(+) (degQ) [Bacillus sp. PDNC022]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696