Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | M3Q_RS18315 | Genome accession | NC_018706 |
| Coordinates | 3857911..3858345 (-) | Length | 144 a.a. |
| NCBI ID | WP_000993717.1 | Uniprot ID | A0AAN5WG10 |
| Organism | Acinetobacter baumannii TYTH-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3852911..3863345
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3Q_RS18290 (M3Q_3604) | - | 3853269..3853652 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| M3Q_RS18295 (M3Q_3605) | - | 3853862..3854056 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| M3Q_RS18300 (M3Q_3606) | bfr | 3854301..3854765 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| M3Q_RS18305 (M3Q_3607) | - | 3854807..3856435 (-) | 1629 | WP_001988049.1 | PglL family O-oligosaccharyltransferase | - |
| M3Q_RS18310 (M3Q_3608) | - | 3856543..3857853 (-) | 1311 | WP_000914629.1 | O-antigen ligase | - |
| M3Q_RS18315 (M3Q_3609) | pilA | 3857911..3858345 (-) | 435 | WP_000993717.1 | pilin | Machinery gene |
| M3Q_RS18320 (M3Q_3610) | - | 3858687..3859247 (-) | 561 | WP_000258955.1 | TPM domain-containing protein | - |
| M3Q_RS18325 (M3Q_3611) | - | 3859241..3860323 (-) | 1083 | WP_001246375.1 | YgcG family protein | - |
| M3Q_RS18330 (M3Q_3612) | - | 3860345..3860935 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| M3Q_RS18335 (M3Q_3613) | - | 3861066..3861953 (-) | 888 | WP_001017314.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14873.98 Da Isoelectric Point: 8.1106
>NTDB_id=53876 M3Q_RS18315 WP_000993717.1 3857911..3858345(-) (pilA) [Acinetobacter baumannii TYTH-1]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=53876 M3Q_RS18315 WP_000993717.1 3857911..3858345(-) (pilA) [Acinetobacter baumannii TYTH-1]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
53.061 |
100 |
0.542 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae strain A1552 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae C6706 |
44.966 |
100 |
0.465 |
| pilA | Pseudomonas aeruginosa PAK |
41.558 |
100 |
0.444 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.366 |
98.611 |
0.437 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.431 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.553 |
97.917 |
0.417 |
| pilA | Vibrio campbellii strain DS40M4 |
40.278 |
100 |
0.403 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44 |
86.806 |
0.382 |