Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | M3Q_RS18265 | Genome accession | NC_018706 |
| Coordinates | 3848139..3848612 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii TYTH-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3843139..3853612
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3Q_RS18250 (M3Q_3596) | pilX | 3845768..3846586 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| M3Q_RS18255 (M3Q_3597) | pilW | 3846583..3847584 (-) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| M3Q_RS18260 (M3Q_3598) | pilV | 3847585..3848145 (-) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| M3Q_RS18265 (M3Q_3599) | fimU | 3848139..3848612 (-) | 474 | WP_001214061.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| M3Q_RS18270 (M3Q_3600) | ispH | 3848782..3849732 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| M3Q_RS18275 (M3Q_3601) | gmk | 3849855..3850484 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| M3Q_RS18280 (M3Q_3602) | rpoZ | 3850557..3850835 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| M3Q_RS19465 | - | 3850874..3851003 (+) | 130 | Protein_3600 | hypothetical protein | - |
| M3Q_RS18285 (M3Q_3603) | - | 3851043..3853148 (+) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=53875 M3Q_RS18265 WP_001214061.1 3848139..3848612(-) (fimU) [Acinetobacter baumannii TYTH-1]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=53875 M3Q_RS18265 WP_001214061.1 3848139..3848612(-) (fimU) [Acinetobacter baumannii TYTH-1]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |