Detailed information NTG0538113

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: LJA36_RS12315
• Genome accession: NZ_CP085282
• Coordinates: 2614303..2616288 (+)
• Length: 661 a.a.
• NCBI ID: WP_003151439.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain TPS17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2609303..2621288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJA36_RS12300	-	2610394..2611017 (-)	624	WP_015240677.1	TetR/AcrR family transcriptional regulator	-
LJA36_RS12305	-	2611089..2613590 (-)	2502	WP_040238846.1	PEP/pyruvate-binding domain-containing protein	-
LJA36_RS12310	-	2613891..2614127 (+)	237	WP_003151438.1	CsbA family protein	-
LJA36_RS12315	uvrB	2614303..2616288 (+)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
LJA36_RS12320	uvrA	2616296..2619169 (+)	2874	WP_040238848.1	excinuclease ABC subunit UvrA	Machinery gene
LJA36_RS12325	-	2619195..2619455 (-)	261	WP_012118557.1	hypothetical protein	-
LJA36_RS12330	-	2619653..2619979 (+)	327	WP_003151444.1	hypothetical protein	-
LJA36_RS12335	-	2620004..2621101 (+)	1098	WP_015418314.1	DUF4097 domain-containing protein	-

Sequence

Protein

• Length: 661 a.a.
• Molecular weight: 76447.20 Da
• Isoelectric Point: 5.1906

>NTDB_id=538113 LJA36_RS12315 WP_003151439.1 2614303..2616288(+) (uvrB) [Bacillus amyloliquefaciens strain TPS17]
MKDRFELVSKYQPQGDQPQAIEKLVKGIQEGRKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF
FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYREMVVS
LRPEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAILNIEQELEERLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS
TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE
IEHTPEMIEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKHDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITNSM
EIAINETKRRREQQERFNEIHGITPQTINKEIRDVIRATQAAEDKEEYKTKAAPKLAKMTKKERQKVVEQMEHEMKEAAR
ALDFERAAELRDLLLELKAEG

Nucleotide

• Length: 1986 bp

>NTDB_id=538113 LJA36_RS12315 WP_003151439.1 2614303..2616288(+) (uvrB) [Bacillus amyloliquefaciens strain TPS17]
GTGAAAGATCGTTTTGAGTTAGTCTCGAAATATCAGCCCCAGGGAGATCAGCCGCAAGCGATTGAGAAGCTTGTCAAAGG
CATACAGGAAGGCAGAAAACACCAGACTCTCCTGGGTGCGACAGGGACGGGCAAAACCTTTACCGTGTCCAATCTGATTA
AAGAAGTGAATAAACCGACACTGGTCATTGCCCATAACAAAACCCTTGCCGGACAGCTGTACAGCGAGTTTAAGGAGTTT
TTCCCGAACAATGCTGTCGAATATTTTGTCAGCTATTACGATTACTATCAGCCGGAGGCGTACGTGCCTCAAACGGATAC
TTTTATAGAGAAAGACGCAAGCATTAATGATGAAATTGATAAACTGAGACACTCCGCGACATCCTCTCTGTTTGAACGGA
GAGATGTCATTATTATCGCGAGTGTGTCATGCATATACGGTCTCGGTTCGCCTGAAGAATACCGGGAGATGGTTGTGTCG
CTCAGACCGGAAATGGAGATTGAGCGGAACGAGCTGCTGAGAAAGCTTGTGGATATCCAGTATGCCCGCAATGATATCGA
CTTTCAGCGCGGGACGTTCCGCGTGCGCGGAGACGTTGTGGAAATCTTCCCGGCTTCCCGTGACGAACATTGTATCAGAG
TGGAATTTTTCGGAGACGAAATTGAGCGGATCAGAGAGGTCGACGCTTTGACCGGAGAAATTCTCGGCGACCGTGACCAT
GTCGCGATTTTTCCGGCTTCCCACTTCGTCACCCGGGCGGAAAAGATGGAAAAAGCGATTCTGAATATTGAACAGGAGCT
TGAGGAGCGCTTGAAAGTGATGCATGAAAACGGCAAGCTCCTTGAAGCGCAGCGGCTTGAGCAGCGGACGAGATACGATC
TTGAAATGATGCGGGAAATGGGTTTTTGCTCAGGGATCGAGAACTATTCAAGACATTTGACACTCCGTCCGCCGGGCTCT
ACGCCATATACGCTGCTTGATTATTTTCCGGACGATTTTATGATTGTCGTTGATGAATCACATGTGACGATTCCGCAGGT
GCGCGGCATGTTCAACGGTGACCAGGCGAGAAAACAGGTGCTTGTCGATCACGGGTTCCGCCTGCCGTCAGCGCTTGACA
ACCGTCCGCTCCGATTCGAGGAATTTGAGAAACACATGCACAATATCGTGTACGTGTCGGCGACTCCGGGACCGTATGAA
ATTGAGCATACGCCGGAAATGATCGAGCAGATCATCAGACCGACGGGACTCCTCGATCCCCTCATTGACGTCCGTCCGAT
CGAAGGACAGATTGATGATCTGATCGGCGAGATTCAGGCGAGGATAGAACGGAATGAACGCGTTCTCGTGACGACTTTAA
CGAAAAAAATGTCAGAGGATCTGACCGATTATCTCAAGGAAATCGGCATCAAGGTCAATTATCTGCATTCCGAGATTAAG
ACGCTTGAACGGATTGAAATCATCCGTGACCTCCGCCTCGGAAAACATGATGTGTTAATCGGCATCAACCTGCTGAGGGA
AGGGCTTGATATTCCGGAAGTGTCACTTGTCGCCATTCTCGATGCGGATAAAGAAGGCTTCCTACGTTCTGAACGTTCGC
TGATTCAGACGATCGGACGGGCGGCACGAAACGCGGAAGGCCGCGTCATCATGTATGCCGATAAAATCACGAATTCGATG
GAAATCGCGATTAATGAAACGAAGCGCCGCCGGGAACAGCAGGAGCGCTTTAACGAAATTCACGGCATTACGCCGCAAAC
GATCAATAAGGAAATCCGCGATGTGATCCGCGCGACGCAGGCCGCTGAGGATAAAGAAGAATATAAAACAAAAGCCGCGC
CTAAACTGGCGAAGATGACGAAGAAAGAACGCCAGAAAGTCGTTGAGCAAATGGAGCACGAAATGAAAGAAGCGGCCAGA
GCGCTTGATTTCGAGCGGGCGGCAGAGCTTCGTGATTTACTGTTAGAGCTTAAAGCGGAAGGATGA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (440-544)

• UvrB/uvrC motif (UVR) (626-659)

• Ultra-violet resistance protein B (UvrB) (551-593)

• Type III restriction enzyme, res subunit (ResIII) (12-130)

• UvrB interaction domain (UvrB_inter) (159-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	70.472	99.395	0.7
uvrB	Streptococcus pneumoniae R6	70.32	99.395	0.699
uvrB	Streptococcus pneumoniae D39	70.32	99.395	0.699