Detailed information NTG0537538

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: LIN96_RS08545
• Genome accession: NZ_CP085090
• Coordinates: 1721553..1723595 (-)
• Length: 680 a.a.
• NCBI ID: WP_014167870.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 31R
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1716553..1728595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIN96_RS08525	-	1716735..1717865 (+)	1131	WP_249847462.1	N-acetylneuraminate epimerase	-
LIN96_RS08530	nagE	1718114..1719580 (+)	1467	WP_005566531.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	-
LIN96_RS08535	-	1719919..1719999 (-)	81	Protein_1644	IS200/IS605 family transposase	-
LIN96_RS08540	ompA	1720256..1721326 (-)	1071	WP_005566529.1	porin OmpA	-
LIN96_RS08545	uvrB	1721553..1723595 (-)	2043	WP_014167870.1	excinuclease ABC subunit UvrB	Machinery gene
LIN96_RS08555	zevB	1724207..1725238 (-)	1032	WP_005551275.1	zinc transporter permease subunit ZevB	-
LIN96_RS08560	zevA	1725253..1725885 (-)	633	WP_269190330.1	zinc transporter binding subunit ZevA	-
LIN96_RS08565	ettA	1726298..1727968 (+)	1671	WP_005566523.1	energy-dependent translational throttle protein EttA	-

Sequence

Protein

• Length: 680 a.a.
• Molecular weight: 77511.03 Da
• Isoelectric Point: 5.2054

>NTDB_id=537538 LIN96_RS08545 WP_014167870.1 1721553..1723595(-) (uvrB) [Aggregatibacter actinomycetemcomitans strain 31R]
MSEKINTKPFILHSHFKPSGDQPQAIAKLAENLEDGLAHQTLLGVTGSGKTFTIANVIAQLNRPAMVLAPNKTLAAQLYA
EMKDFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYL
KMMLHLQQGAIINQRQILAKLAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRAVRIELFDDEIERLSLFDPLTGSSF
GTVPRFTVYPKTHYVTPRERILDAIEKIKLELAQRREYFIKENKLLEEQRISQRTQFDIEMMNELGYCSGIENYSRYLSG
RNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSAT
PGPYELEKSGGEIIDQVVRPTGLLDPQIEIRPVSIQVDDLLSEARHRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLHGKAILYAD
NITKSMEKAITETNRRREKQAKYNEAQGIVPQALNKKVGELLDIGQGANQKAKANKQRGKTVAEPTALYTTPKSPKEYQQ
QIKKLEQQMYKFAQDLEFEKAAATRDQLQQLRESFMLSSE

Nucleotide

• Length: 2043 bp

>NTDB_id=537538 LIN96_RS08545 WP_014167870.1 1721553..1723595(-) (uvrB) [Aggregatibacter actinomycetemcomitans strain 31R]
ATGTCAGAAAAAATTAACACTAAACCTTTTATTCTTCATTCCCATTTCAAACCCTCCGGCGACCAACCCCAGGCCATCGC
AAAATTAGCCGAAAATTTAGAAGATGGCTTGGCACATCAAACCTTGCTTGGGGTAACAGGTTCAGGCAAAACCTTTACCA
TTGCCAATGTGATTGCGCAATTGAATCGCCCTGCGATGGTGTTGGCACCGAACAAAACCCTTGCCGCCCAGCTTTATGCC
GAAATGAAGGATTTTTTCCCGGAAAATGCGGTGGAATATTTTGTTTCTTACTATGATTATTATCAGCCCGAAGCCTATGT
GCCGAGTAGCGATACTTTTATTGAGAAAGACGCGTCTATTAATGATCAAATTGAACAAATGCGACTTTCCGCCACAAAAT
CTTTCTTAGAACGGCGCGATACTATTGTAGTGGCGTCCGTGTCCGCTATTTATGGTTTAGGAGACCCCGATTCCTATTTA
AAAATGATGCTGCATTTGCAACAAGGCGCGATTATTAATCAGCGCCAAATCTTGGCAAAATTGGCAGAGTTGCAATATAC
CCGTAATGATCAGGCGTTTCAGCGCGGAACGTTCCGTGTACGGGGAGAAATTATTGATATTTTCCCGGCGGAATCGGACG
ATCGGGCGGTACGTATCGAATTATTTGATGATGAAATCGAACGCTTGAGTTTATTTGATCCGCTCACCGGCAGCAGCTTC
GGCACGGTGCCGCGCTTTACCGTTTATCCGAAAACGCACTATGTCACACCGCGCGAGCGTATCTTGGATGCCATCGAAAA
AATTAAACTGGAATTGGCGCAACGGCGGGAGTATTTCATTAAAGAAAATAAATTATTGGAAGAGCAGCGTATCAGCCAAC
GTACCCAATTTGATATTGAGATGATGAATGAACTCGGTTATTGCTCGGGCATTGAAAACTATTCCCGCTATTTATCGGGT
AGAAATGAGGGCGAACCGCCACCGACCTTATTTGATTATATGCCGTCTGACGCAATTTTGATTATTGACGAATCCCACGT
CACCGTGCCACAAATCGGTGGGATGTATCGCGGCGATCGCTCCCGTAAAGAAACCTTGGTGGAATATGGTTTTCGTCTGC
CTTCTGCGTTGGATAACCGTCCGTTACGTTTTGAAGAATTTGAACGTTTGGCACCGCAAACCATTTATGTTTCCGCCACA
CCGGGACCGTATGAACTGGAAAAATCCGGTGGGGAAATTATCGACCAAGTAGTGCGTCCGACAGGTTTGCTTGATCCGCA
AATTGAAATTCGCCCGGTATCTATTCAGGTGGATGATTTACTTTCCGAAGCACGCCACAGAGCGGATAAAAATGAACGCG
TTTTAGTGACGACATTAACGAAGAAAATGGCGGAAGATCTTACCGACTATTTAGATGAACATGGTATTCGCGTACGTTAT
TTGCATTCTGATATTGATACTGTCGAACGGGTGGAAATTATTCGTGATTTGCGCTTGGGGGAATTTGATGTTTTAGTCGG
CATTAACTTATTACGGGAAGGTTTAGATATTCCGGAAGTGTCTTTAGTGGCAATTTTAGATGCGGATAAAGAAGGTTTTT
TACGTTCCGAGCGTTCATTAATTCAAACGATCGGACGTGCTGCGCGAAATTTACACGGAAAAGCCATTTTGTATGCGGAT
AATATAACCAAATCAATGGAGAAAGCTATTACCGAAACCAATCGTCGGCGTGAGAAACAAGCAAAATATAATGAAGCACA
GGGCATTGTGCCGCAGGCATTAAATAAAAAGGTAGGCGAGTTGTTAGATATCGGTCAGGGTGCCAATCAGAAAGCCAAAG
CCAATAAACAACGTGGAAAAACGGTGGCAGAACCGACCGCACTTTATACAACGCCGAAATCACCGAAAGAATATCAGCAA
CAGATTAAGAAACTTGAGCAGCAAATGTATAAATTTGCACAGGATTTGGAATTTGAGAAAGCTGCTGCAACGCGCGATCA
GTTACAACAATTACGGGAAAGTTTTATGTTATCAAGTGAGTAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (446-549)

• Ultra-violet resistance protein B (UvrB) (557-598)

• UvrB interaction domain (UvrB_inter) (164-254)

• UvrB/uvrC motif (UVR) (640-673)

• Type III restriction enzyme, res subunit (ResIII) (17-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	57.143	98.824	0.565
uvrB	Streptococcus pneumoniae R6	57.143	98.824	0.565
uvrB	Streptococcus pneumoniae D39	57.143	98.824	0.565