Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6K87_RS09545 Genome accession   NZ_CP069892
Coordinates   1921273..1923039 (+) Length   588 a.a.
NCBI ID   WP_070670598.1    Uniprot ID   A0A1F0NDV2
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1916273..1928039
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS09525 (I6K87_09525) - 1917119..1919017 (+) 1899 WP_070670603.1 sucrose-specific PTS transporter subunit IIBC -
  I6K87_RS09530 (I6K87_09530) scrK 1919291..1920190 (+) 900 WP_049534497.1 fructokinase ScrK -
  I6K87_RS09535 (I6K87_09535) - 1920255..1920665 (+) 411 WP_059221459.1 peptide deformylase -
  I6K87_RS09540 (I6K87_09540) - 1920822..1921280 (+) 459 WP_070670601.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6K87_RS09545 (I6K87_09545) rcrP 1921273..1923039 (+) 1767 WP_070670598.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS09550 (I6K87_09550) rcrQ 1923029..1924789 (+) 1761 WP_003027423.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS09555 (I6K87_09555) - 1924999..1925313 (+) 315 WP_022525145.1 PTS cellobiose transporter subunit IIB -
  I6K87_RS09560 (I6K87_09560) - 1925324..1925644 (+) 321 WP_003027417.1 PTS cellobiose transporter subunit IIA -
  I6K87_RS09565 (I6K87_09565) - 1925778..1927175 (-) 1398 WP_204982606.1 glycoside hydrolase family 1 protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65321.97 Da        Isoelectric Point: 6.1196

>NTDB_id=537290 I6K87_RS09545 WP_070670598.1 1921273..1923039(+) (rcrP) [Streptococcus anginosus strain FDAARGOS_1357]
MFKLFKRLTAKEVGMIVISILFTCLTVYLELEVPTYISKITELLQTRGTVVSDLWNPGLKMIGLSFASFLSAVAVGFIAA
RLAASFTTSLRSDIFNRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNIIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAALPERLPIFSDMVVFMSYAMQVVMGFMLMAALFIILPRTLVSAGRINEVLDLY
STIESPEHPKEAKDIKGEVVFDNVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGRILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWAALDLAQAKSFVEEKEGGLHSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKDTTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNAVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=537290 I6K87_RS09545 WP_070670598.1 1921273..1923039(+) (rcrP) [Streptococcus anginosus strain FDAARGOS_1357]
ATGTTTAAATTATTTAAACGTTTAACTGCTAAAGAAGTAGGGATGATTGTCATTAGTATCTTGTTTACTTGTTTAACAGT
TTATTTGGAATTAGAGGTTCCAACTTATATTTCAAAAATTACGGAACTCCTACAGACGAGAGGGACAGTAGTTTCTGACC
TGTGGAATCCAGGTTTGAAAATGATTGGCTTATCTTTTGCAAGCTTTCTAAGTGCAGTAGCAGTTGGCTTTATAGCGGCT
AGATTAGCAGCTAGCTTTACGACGAGTTTGCGGTCGGATATTTTCAATCGTGTACTGGATTATTCAGATGCCGAAATTAA
GAGATTTTCTATTCCGAGTCTTTTGACCCGGACAACCAATGATCTTACGCAAATTCAACTTATGATTACAATGGGCTTGC
AAGTTGTGACTCGTGGACCGATTATGGCGATTTGGGCGATTACGAAAATCATTGGGAAATCAGAATATTGGCTCTGGGCA
GTTATTGTGGCGGTAATTGTGAATATTATCATGACAACAGTTCTGATGACGCTTGCCTTTCCAAAGCAATCCGTTATTCA
ACGGTTGACTGATAAGTTGAACAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGGGCTTACAATGCTGAAG
ACTATCAAGATGACAAGTTTGCAGGAGCCAATGATGAAGTGACTCGTTTGAATCTCTTTGTCAGTCGTCTCATGGCAATT
TTAAATCCAATTATGATGGGGATTTCGAGCGGATTGACTTTAGCGATTTATTGGATTGGGGCTTACTTGATTCAAGACGC
AGCTTTACCAGAGCGATTGCCTATCTTTAGTGATATGGTAGTCTTTATGTCTTATGCCATGCAAGTGGTAATGGGCTTCA
TGCTCATGGCGGCTCTTTTTATCATTCTACCTCGTACCTTGGTGTCTGCTGGACGGATTAATGAAGTGCTTGATTTATAT
TCAACGATTGAGTCTCCAGAACACCCTAAAGAAGCTAAAGATATTAAAGGAGAAGTGGTATTTGACAATGTGTCTTTCCG
CTATGCTAAAAACTCTGAGGCTGTCATTGAGCATGTCAGCTTTACAGCAAAAGCAGGTGAAACCGTAGCTTTCATTGGTT
CAACCGGTTCTGGGAAATCTACTCTAATTAGCTTAATTCCTCGTTTTTATGATGTGACAGAAGGAAGAATTTTAGTAGAC
GGCGTAAACGTCAAAGATTATCAGCTAGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATAAAGAGTAATTTGGACTTTGGACAAAGCAATGAAAGTCCATTGGATGATGAAAAAATGTGGGCTGCGTTGG
ACTTGGCACAAGCGAAATCATTTGTTGAAGAAAAAGAAGGTGGTCTGCACTCAGAGGTCGCACAAAGCGGGACCAATTTC
TCTGGTGGGCAAAAGCAACGTTTGGCAATTGCGCGTGCGCTTGCTCGCAAGCCTGAAATTTTGATTTTTGATGATTCATT
TTCAGCGCTGGACTATAAGACAGACCGCATTTTGCGGGAAGAATTAGCGAAAAAAGTGAAGGACACAACCAGATTGATTG
TGGCGCAGCGGATTTCAACGATTATGGATGCTGATCAGATTTTGGTACTGGATAAAGGAAAAGTAGTCGGTCAGGGTACT
CATAAAGAATTGCTGGCAACGAACGCAGTTTACCAAGAAATTGCTTACTCACAATTATCAAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-291)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F0NDV2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

71

100

0.724