Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6K87_RS05830 Genome accession   NZ_CP069892
Coordinates   1190591..1192549 (-) Length   652 a.a.
NCBI ID   WP_059221150.1    Uniprot ID   A0A1F0NLH5
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1185591..1197549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS05790 (I6K87_05790) - 1186338..1186703 (-) 366 WP_003025907.1 Asp23/Gls24 family envelope stress response protein -
  I6K87_RS05795 (I6K87_05795) rpmB 1186877..1187065 (-) 189 WP_003025909.1 50S ribosomal protein L28 -
  I6K87_RS05800 (I6K87_05800) - 1187200..1187862 (-) 663 WP_006267355.1 LiaF transmembrane domain-containing protein -
  I6K87_RS05805 (I6K87_05805) - 1187868..1188314 (-) 447 WP_003031093.1 LytTR family DNA-binding domain-containing protein -
  I6K87_RS05815 (I6K87_05815) - 1188652..1189113 (-) 462 WP_049533550.1 GNAT family N-acetyltransferase -
  I6K87_RS05820 (I6K87_05820) - 1189218..1190099 (-) 882 WP_003025917.1 class II fructose-bisphosphate aldolase -
  I6K87_RS05830 (I6K87_05830) amiA3 1190591..1192549 (-) 1959 WP_059221150.1 peptide ABC transporter substrate-binding protein Regulator
  I6K87_RS05835 (I6K87_05835) - 1192859..1193794 (+) 936 WP_049533395.1 IS30 family transposase -
  I6K87_RS05840 (I6K87_05840) mraY 1194135..1195118 (-) 984 WP_049533333.1 phospho-N-acetylmuramoyl-pentapeptide- transferase -
  I6K87_RS05845 (I6K87_05845) pbp2X 1195120..1197375 (-) 2256 WP_204982460.1 penicillin-binding protein PBP2X -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72371.57 Da        Isoelectric Point: 8.5405

>NTDB_id=537256 I6K87_RS05830 WP_059221150.1 1190591..1192549(-) (amiA3) [Streptococcus anginosus strain FDAARGOS_1357]
MKSSKWIIATGVVLSAGILLSGCGKSASSTSTYSYVYTQDPDTLNYLMANRATTSDVVTNLVDGLLENDQYGNLVPALAK
SWTVSKDGLTYTYKLRKDAKWYTSEGEEYASVKAQDFVTGLKYAADNKSEALYLVQDSVKGLDAYIKGETKDFSTVGVKA
LDDYTVQYTLSRAETYWNSKTTNNILFPVNADFLKSQGKNFGSVKPTSILYNGPYLLKSLTAKSSMEFAKNPHYYDKKNV
HLDNIKLTYYDGSDQEALIRNFTDGAYSAARLYPNSSSFASVKKQYANNIIYSLQDATSYYYNFNLNRQSYNHTSKKTDA
QKAATQEAVLNKAFRQAINFAYNRTSYGAQSNGKDGATKVLRNTLVPPTFVSIGDKTFGDVVSSKLVNYGSEWSNMNLAD
AQDAYYNPEKAKAKFAQAKAELQAKGVQFPIHLDVPTDQTSKIGVQSESSMKQSVESVLGTENVVIDIQQMSSDELNNIS
YFANTAAQKDYDLYNGGWSGDYQDPSTYLDTLNTKNGGSLQNFGLEPGQENDKIKAVGLDTYTEMLAEANAETNETKRYE
KYAKAQAWLIDSGLTMPNLSLGGTPSVTKTVPFSRSYSLVGIKGGSSSYFKYVKLQDKIVTTKEYENAKKKWLKEKETSN
KKAQDDYENHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=537256 I6K87_RS05830 WP_059221150.1 1190591..1192549(-) (amiA3) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAATCATCAAAATGGATTATTGCAACAGGAGTTGTGCTAAGCGCTGGAATCCTATTATCAGGTTGTGGCAAGTCAGC
TTCTAGCACATCAACTTATTCATACGTGTATACACAAGATCCAGACACGCTAAATTATCTGATGGCGAACCGTGCGACAA
CTTCAGATGTTGTGACTAACTTAGTTGATGGATTATTGGAAAATGACCAGTACGGAAATTTAGTTCCGGCGCTTGCTAAG
TCATGGACAGTCTCCAAAGATGGCTTGACATATACGTATAAATTACGTAAAGATGCTAAATGGTACACATCAGAAGGTGA
AGAGTACGCAAGTGTAAAAGCGCAAGACTTTGTAACTGGCTTGAAATACGCCGCAGATAATAAATCAGAAGCCCTTTACC
TCGTTCAAGATTCTGTCAAAGGTTTGGATGCTTACATCAAGGGGGAAACGAAAGATTTTTCAACGGTTGGAGTAAAAGCT
CTAGATGACTATACAGTACAGTATACACTCAGCCGTGCAGAGACTTATTGGAATTCAAAAACGACCAATAATATCCTCTT
CCCAGTTAATGCAGATTTCTTGAAATCACAAGGAAAAAATTTTGGTTCTGTAAAACCAACCAGCATTCTATACAATGGTC
CGTATCTGTTGAAATCTCTGACGGCCAAGTCTTCTATGGAATTTGCTAAAAATCCTCATTACTATGATAAAAAGAATGTT
CATTTGGACAATATCAAATTGACATATTATGACGGCTCTGACCAAGAAGCCCTTATCCGTAACTTCACAGATGGTGCCTA
TAGTGCAGCTCGTCTTTATCCAAATAGCTCTAGTTTTGCTTCTGTTAAGAAACAATATGCTAACAATATCATCTATAGTT
TGCAAGATGCGACCAGCTACTATTATAACTTTAATTTAAATCGTCAGTCTTACAACCATACATCTAAGAAAACAGATGCT
CAAAAGGCTGCGACCCAAGAAGCGGTGCTAAATAAAGCTTTCCGCCAAGCTATCAACTTTGCCTATAATCGTACTTCTTA
TGGTGCACAAAGTAATGGGAAAGACGGAGCGACAAAGGTATTGCGGAACACACTCGTGCCACCAACATTTGTTTCTATCG
GTGATAAAACGTTTGGTGATGTTGTGTCTTCTAAATTGGTAAACTATGGTTCAGAATGGTCAAATATGAATTTGGCCGAT
GCACAAGATGCTTATTACAATCCAGAAAAAGCCAAGGCGAAGTTTGCTCAAGCTAAAGCAGAATTGCAAGCAAAAGGTGT
TCAGTTCCCTATTCACTTAGATGTACCGACTGATCAGACAAGCAAAATTGGTGTTCAATCGGAAAGTTCCATGAAGCAAT
CTGTTGAGTCTGTCTTGGGCACAGAAAATGTTGTCATTGATATTCAACAAATGAGTTCAGATGAATTAAATAATATCAGT
TATTTTGCTAATACAGCTGCTCAAAAGGACTATGATCTGTATAATGGTGGCTGGTCTGGTGACTATCAAGACCCATCTAC
TTATTTAGATACTTTGAATACAAAAAATGGTGGTAGTTTACAAAACTTTGGTCTGGAGCCAGGTCAAGAAAATGATAAGA
TTAAGGCAGTTGGACTGGACACGTATACAGAGATGTTAGCAGAAGCAAATGCTGAAACCAATGAAACGAAGCGCTATGAA
AAATATGCCAAAGCACAAGCGTGGTTAATTGATAGTGGCTTGACAATGCCAAACCTGTCTCTTGGGGGAACACCATCCGT
GACGAAAACAGTTCCATTTAGTCGTTCTTATTCTCTAGTCGGCATTAAAGGTGGATCAAGCAGTTATTTTAAATATGTCA
AACTGCAAGACAAGATTGTAACAACAAAAGAATACGAAAATGCCAAAAAGAAATGGCTAAAAGAAAAAGAAACTTCTAAT
AAAAAAGCACAAGATGACTACGAAAATCATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F0NLH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

57.534

100

0.58
  amiA3 Streptococcus thermophilus LMG 18311

57.382

100

0.578
  amiA Streptococcus salivarius strain HSISS4

57.382

100

0.578