Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   I6J46_RS02985 Genome accession   NZ_CP069586
Coordinates   636188..636715 (-) Length   175 a.a.
NCBI ID   WP_017481730.1    Uniprot ID   A0A010ITU2
Organism   Acinetobacter pittii strain FDAARGOS_1216     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 631188..641715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J46_RS02965 (I6J46_02965) - 631421..632290 (-) 870 WP_204085553.1 hypothetical protein -
  I6J46_RS02970 (I6J46_02970) aroB 632307..633389 (-) 1083 WP_005067096.1 3-dehydroquinate synthase -
  I6J46_RS02975 (I6J46_02975) aroK 633418..633987 (-) 570 WP_002116987.1 shikimate kinase AroK -
  I6J46_RS02980 (I6J46_02980) pilQ 633999..636125 (-) 2127 WP_204085554.1 type IV pilus secretin PilQ Machinery gene
  I6J46_RS02985 (I6J46_02985) pilP 636188..636715 (-) 528 WP_017481730.1 pilus assembly protein PilP Machinery gene
  I6J46_RS02990 (I6J46_02990) pilO 636727..637506 (-) 780 WP_005067082.1 type 4a pilus biogenesis protein PilO Machinery gene
  I6J46_RS02995 (I6J46_02995) pilN 637503..638144 (-) 642 WP_032004890.1 PilN domain-containing protein Machinery gene
  I6J46_RS03000 (I6J46_03000) pilM 638144..639202 (-) 1059 WP_005067078.1 pilus assembly protein PilM Machinery gene

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19253.42 Da        Isoelectric Point: 9.7299

>NTDB_id=535767 I6J46_RS02985 WP_017481730.1 636188..636715(-) (pilP) [Acinetobacter pittii strain FDAARGOS_1216]
MKLKKILLSLGIGLVLVGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=535767 I6J46_RS02985 WP_017481730.1 636188..636715(-) (pilP) [Acinetobacter pittii strain FDAARGOS_1216]
ATGAAACTAAAGAAAATTTTACTTTCTCTGGGGATAGGCTTGGTTTTGGTTGGATGCGACTCTAGAATCGACGCCGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCTGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATCTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A010ITU2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

88

100

0.88
  comL Acinetobacter baylyi ADP1

73.964

96.571

0.714