Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6J38_RS07260 Genome accession   NZ_CP069558
Coordinates   1454710..1455477 (+) Length   255 a.a.
NCBI ID   WP_003071657.1    Uniprot ID   U2YCD6
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449710..1460477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS07230 (I6J38_07230) comE 1450270..1451019 (-) 750 WP_003071650.1 competence system response regulator transcription factor ComE Regulator
  I6J38_RS07235 (I6J38_07235) comD/comD1 1451019..1452332 (-) 1314 WP_020998131.1 GHKL domain-containing protein Regulator
  I6J38_RS07240 (I6J38_07240) - 1452352..1452498 (-) 147 WP_006268843.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  I6J38_RS07250 (I6J38_07250) rlmH 1452781..1453260 (-) 480 WP_006268880.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6J38_RS07255 (I6J38_07255) htrA 1453465..1454655 (+) 1191 WP_006270334.1 S1C family serine protease Regulator
  I6J38_RS07260 (I6J38_07260) spo0J 1454710..1455477 (+) 768 WP_003071657.1 ParB/RepB/Spo0J family partition protein Regulator
  I6J38_RS07265 (I6J38_07265) dnaA 1455706..1457049 (+) 1344 WP_020997506.1 chromosomal replication initiator protein DnaA -
  I6J38_RS07270 (I6J38_07270) dnaN 1457206..1458342 (+) 1137 WP_006268813.1 DNA polymerase III subunit beta -
  I6J38_RS07275 (I6J38_07275) - 1458342..1458539 (+) 198 WP_003071662.1 DUF951 domain-containing protein -
  I6J38_RS07280 (I6J38_07280) - 1458626..1459126 (-) 501 WP_006268820.1 YehR family lipoprotein -
  I6J38_RS07285 (I6J38_07285) ychF 1459273..1460388 (+) 1116 WP_006268857.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29713.19 Da        Isoelectric Point: 9.5149

>NTDB_id=535548 I6J38_RS07260 WP_003071657.1 1454710..1455477(+) (spo0J) [Streptococcus constellatus strain FDAARGOS_1208]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIMEAIKEGRISQGHA
RLLINLSEKEQNQWFTKILSQELSVRQLEKQLHPHQKKTSAKNKYQLFLKEEENRLKKIFGTEISLQFSKQSQSGKICIH
FSSQEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=535548 I6J38_RS07260 WP_003071657.1 1454710..1455477(+) (spo0J) [Streptococcus constellatus strain FDAARGOS_1208]
ATGGAAAAATATCAATATATTACACTCAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCAATAATTGGTT
ATGAATTATTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACTAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATTATTGAAAATTTACAACGAGAAGACTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTAATTGACAAAGGGTTGACACACAAAGAAATCGCTCAAACAATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGTTTATTAAACTTACCTCTTAATATTATGGAAGCGATAAAAGAAGGAAGAATTTCTCAAGGACATGCT
CGTTTACTTATCAACTTATCAGAAAAAGAGCAAAATCAGTGGTTCACTAAAATCCTATCTCAAGAACTTTCAGTTCGACA
GCTAGAAAAACAATTGCATCCACATCAAAAAAAGACTTCAGCAAAAAACAAGTACCAACTTTTTCTCAAAGAAGAAGAAA
ACAGATTAAAAAAGATATTCGGTACAGAAATCTCACTCCAATTTTCTAAGCAATCGCAATCTGGAAAAATCTGTATTCAC
TTTTCAAGTCAAGAAGAATATCAAAGAATTATTGATAGCTTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-190)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2YCD6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.725

100

0.537