Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   I6J44_RS08800 Genome accession   NZ_CP069537
Coordinates   1863604..1864311 (-) Length   235 a.a.
NCBI ID   WP_005070320.1    Uniprot ID   A0A009I7W0
Organism   Acinetobacter pittii strain FDAARGOS_1214     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1858604..1869311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J44_RS08780 (I6J44_08780) purA 1859686..1861005 (+) 1320 WP_002121613.1 adenylosuccinate synthase -
  I6J44_RS08785 (I6J44_08785) - 1861128..1861445 (+) 318 WP_002121533.1 hypothetical protein -
  I6J44_RS08790 (I6J44_08790) - 1861561..1862340 (+) 780 WP_016802789.1 M48 family metallopeptidase -
  I6J44_RS08795 (I6J44_08795) tas 1862395..1863444 (-) 1050 WP_016802790.1 NADP(H)-dependent aldo-keto reductase -
  I6J44_RS08800 (I6J44_08800) crp 1863604..1864311 (-) 708 WP_005070320.1 cAMP-activated global transcriptional regulator CRP Regulator
  I6J44_RS08805 (I6J44_08805) - 1864552..1864671 (+) 120 WP_002121587.1 hypothetical protein -
  I6J44_RS08810 (I6J44_08810) - 1864750..1865172 (+) 423 WP_016802791.1 OsmC family protein -
  I6J44_RS08815 (I6J44_08815) phnO 1865263..1865694 (+) 432 WP_002121619.1 GNAT family N-acetyltransferase -
  I6J44_RS08820 (I6J44_08820) - 1865691..1866500 (-) 810 WP_016802792.1 M23 family metallopeptidase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26526.09 Da        Isoelectric Point: 4.6573

>NTDB_id=535440 I6J44_RS08800 WP_005070320.1 1863604..1864311(-) (crp) [Acinetobacter pittii strain FDAARGOS_1214]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENTVSDDDYDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=535440 I6J44_RS08800 WP_005070320.1 1863604..1864311(-) (crp) [Acinetobacter pittii strain FDAARGOS_1214]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCGATTATTTTGCGTGAAGATGACGAACGTGAAATTGTTGTTGCCTATTTAAATCCGGGCGATTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCCGAAGTTCGAACTCGTGATGTCTGTGAAATTGCAGA
GATCTCTTATGACAACTTCCACGAACTTAGCAAACAATACCCAGACTTAAGCTATGCTGTTTTTGCACAATTAGTTCGCC
GTCTAAAAAATACGACTCGTAAAATGACAGATCTTGCGTTCATTGATGTGTCTGGTCGTATTGCACGTTGCTTAATCGAT
CTATCTTCTCAACCAGAAGCAATGATTTTGCCGAATGGTCGTCAAATTCGTATTACTCGTCAAGAAATTGGCCGTATTGT
TGGATGTTCGCGTGAGATGGTTGGCCGTGTACTTAAAACCTTAGAAGATCAAGGTATGATCCAAACTGATGGTAAAGCCA
TTCTTATTTTTGATGCATCATTAGAAGAAAACACTGTTTCTGATGATGACTACGACGATGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009I7W0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

97.447

100

0.974
  crp Vibrio cholerae strain A1552

47.087

87.66

0.413
  crp Haemophilus influenzae Rd KW20

48.718

82.979

0.404