Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | I6J45_RS01215 | Genome accession | NZ_CP069504 |
| Coordinates | 254321..254803 (+) | Length | 160 a.a. |
| NCBI ID | WP_005804550.1 | Uniprot ID | A0A009N252 |
| Organism | Acinetobacter pittii strain FDAARGOS_1215 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 249321..259803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J45_RS01205 (I6J45_01205) | pilX | 249635..250444 (+) | 810 | WP_005067126.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| I6J45_RS01210 (I6J45_01210) | pilY1 | 250456..254310 (+) | 3855 | WP_005804549.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| I6J45_RS01215 (I6J45_01215) | pilY2 | 254321..254803 (+) | 483 | WP_005804550.1 | type IV pilin protein | Machinery gene |
| I6J45_RS01220 (I6J45_01220) | pilE | 254800..255225 (+) | 426 | WP_025464177.1 | type IV pilin protein | Machinery gene |
| I6J45_RS01225 (I6J45_01225) | rpsP | 255373..255624 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| I6J45_RS01230 (I6J45_01230) | rimM | 255644..256192 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| I6J45_RS01235 (I6J45_01235) | trmD | 256235..256990 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| I6J45_RS01240 (I6J45_01240) | rplS | 257210..257578 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| I6J45_RS01245 (I6J45_01245) | lip | 257631..258572 (-) | 942 | WP_078210319.1 | lipase family alpha/beta hydrolase | - |
| I6J45_RS01250 (I6J45_01250) | - | 258688..259719 (-) | 1032 | WP_005804553.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17550.79 Da Isoelectric Point: 8.4721
>NTDB_id=535171 I6J45_RS01215 WP_005804550.1 254321..254803(+) (pilY2) [Acinetobacter pittii strain FDAARGOS_1215]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=535171 I6J45_RS01215 WP_005804550.1 254321..254803(+) (pilY2) [Acinetobacter pittii strain FDAARGOS_1215]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACAGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACAGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
94.375 |
100 |
0.944 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |