Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilX   Type   Machinery gene
Locus tag   I6J45_RS01205 Genome accession   NZ_CP069504
Coordinates   249635..250444 (+) Length   269 a.a.
NCBI ID   WP_005067126.1    Uniprot ID   A0A009NM66
Organism   Acinetobacter pittii strain FDAARGOS_1215     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 244635..255444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J45_RS01170 (I6J45_01170) - 245193..245315 (-) 123 Protein_227 hypothetical protein -
  I6J45_RS01175 (I6J45_01175) rpoZ 245387..245665 (-) 279 WP_002116990.1 DNA-directed RNA polymerase subunit omega -
  I6J45_RS01180 (I6J45_01180) gmk 245738..246367 (-) 630 WP_005804544.1 guanylate kinase -
  I6J45_RS01185 (I6J45_01185) ispH 246490..247440 (+) 951 WP_002116992.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  I6J45_RS01190 (I6J45_01190) fimU 247610..248083 (+) 474 WP_005804545.1 pilus assembly FimT family protein Machinery gene
  I6J45_RS01195 (I6J45_01195) pilV 248077..248637 (+) 561 WP_078210318.1 type IV pilus modification protein PilV Machinery gene
  I6J45_RS01200 (I6J45_01200) pilW 248637..249638 (+) 1002 WP_005804547.1 PilW family protein Machinery gene
  I6J45_RS01205 (I6J45_01205) pilX 249635..250444 (+) 810 WP_005067126.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  I6J45_RS01210 (I6J45_01210) pilY1 250456..254310 (+) 3855 WP_005804549.1 PilC/PilY family type IV pilus protein Machinery gene
  I6J45_RS01215 (I6J45_01215) pilY2 254321..254803 (+) 483 WP_005804550.1 type IV pilin protein Machinery gene
  I6J45_RS01220 (I6J45_01220) pilE 254800..255225 (+) 426 WP_025464177.1 type IV pilin protein Machinery gene

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 28531.35 Da        Isoelectric Point: 7.7238

>NTDB_id=535169 I6J45_RS01205 WP_005067126.1 249635..250444(+) (pilX) [Acinetobacter pittii strain FDAARGOS_1215]
MTHLIHKSRSKEKGATLIVVLIILLIVISVGVLAIRVAIVSLKVATNSQVSQLNFQSSDTPLELIVQMNPTTLTNITNVI
GAALKEHESNPGAEYNFCYKPVSTATNFAQTRGASLLRAGSANNAVVEDGGVAGFCNLTTDYGSNRQAVVTQVAVSVPTD
AASDIPGSNLPRGTNTSEGTQLPKSMLSTQRIRVITTAFLPAYASTSIETLQRDCLSTSSAKISDNFDTALTAKQTLAEC
LANHNVPFSTQVQEFNYTNKLTQITAPGS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=535169 I6J45_RS01205 WP_005067126.1 249635..250444(+) (pilX) [Acinetobacter pittii strain FDAARGOS_1215]
ATGACCCATTTAATTCATAAGAGTAGATCTAAGGAAAAAGGGGCAACCCTTATTGTTGTGCTTATTATTTTATTGATTGT
TATTTCTGTAGGCGTTTTAGCAATAAGAGTGGCTATTGTTTCTTTAAAAGTTGCTACCAATAGCCAAGTTAGCCAATTAA
ATTTTCAGTCATCTGACACTCCTTTAGAACTCATTGTGCAGATGAATCCTACCACCCTAACTAATATTACTAATGTGATT
GGTGCCGCGCTTAAAGAGCATGAAAGTAATCCTGGAGCGGAATACAACTTTTGTTATAAGCCTGTTTCTACAGCAACAAA
TTTTGCTCAGACCAGAGGTGCAAGTTTACTTCGAGCAGGAAGCGCCAATAATGCGGTTGTCGAAGATGGCGGCGTGGCGG
GTTTCTGCAATTTAACAACTGACTATGGAAGTAATCGTCAAGCAGTGGTTACCCAAGTTGCTGTAAGTGTTCCAACAGAT
GCTGCTAGCGATATTCCAGGCTCAAATTTACCACGAGGAACAAATACCTCGGAAGGTACGCAACTTCCTAAAAGCATGTT
GTCTACGCAACGTATTCGAGTGATTACAACTGCTTTTTTGCCAGCCTATGCATCTACCTCTATTGAAACTTTACAAAGAG
ATTGTTTAAGCACGAGTTCGGCAAAAATTAGCGATAATTTTGATACCGCATTAACGGCTAAACAAACATTGGCGGAGTGT
TTGGCAAATCATAACGTGCCTTTTAGTACTCAAGTTCAAGAATTTAACTATACCAATAAACTCACTCAAATTACGGCACC
AGGTTCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009NM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilX Acinetobacter baumannii D1279779

89.706

100

0.907