Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilW   Type   Machinery gene
Locus tag   I6J47_RS15360 Genome accession   NZ_CP069496
Coordinates   3193016..3194017 (+) Length   333 a.a.
NCBI ID   WP_032052645.1    Uniprot ID   A0AAN4MG03
Organism   Acinetobacter pittii strain FDAARGOS_1217     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3188016..3199017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J47_RS15330 (I6J47_15330) - 3189573..3189727 (-) 155 Protein_3003 hypothetical protein -
  I6J47_RS15335 (I6J47_15335) rpoZ 3189766..3190044 (-) 279 WP_002116990.1 DNA-directed RNA polymerase subunit omega -
  I6J47_RS15340 (I6J47_15340) gmk 3190117..3190746 (-) 630 WP_005804544.1 guanylate kinase -
  I6J47_RS15345 (I6J47_15345) ispH 3190869..3191819 (+) 951 WP_032006348.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  I6J47_RS15350 (I6J47_15350) fimU 3191989..3192462 (+) 474 WP_005067119.1 pilus assembly FimT family protein Machinery gene
  I6J47_RS15355 (I6J47_15355) pilV 3192456..3193016 (+) 561 WP_078219781.1 type IV pilus modification protein PilV Machinery gene
  I6J47_RS15360 (I6J47_15360) pilW 3193016..3194017 (+) 1002 WP_032052645.1 PilW family protein Machinery gene
  I6J47_RS15365 (I6J47_15365) pilX 3194014..3194823 (+) 810 WP_204086971.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  I6J47_RS15370 (I6J47_15370) pilY1 3194835..3198689 (+) 3855 WP_032052644.1 PilC/PilY family type IV pilus protein Machinery gene

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 35784.47 Da        Isoelectric Point: 6.6395

>NTDB_id=535103 I6J47_RS15360 WP_032052645.1 3193016..3194017(+) (pilW) [Acinetobacter pittii strain FDAARGOS_1217]
MAHSFVLWKQRGFTLIELMVALALGLILVAAATQLFIGGLLSSRLQKANAEIQDSGIFGLEYIARDIRLLNYGNVTNPIL
TDTTPWGGVVLTGSTATNNNNVNFVPNVGTNTYIADTLLSRGAGDTVSAVSNHWKGLSNIQNTSNAAVQSDQLTIQFIAP
TNMTNCEGVNVLAGDLIVERYFLRLDSNGSSQQDYALACDANTPSTVATAQPTTVAGLGDAGQIVLPRIDHFHVLFGAKN
AAGNFAYYTIPQYRAAAQAARDATPSVMPPRILSIQISVLARSTNNAQSKAIDPEQSFFMLDQTVHASDNTTRFLRRTYN
LTIALRNAMGESL

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=535103 I6J47_RS15360 WP_032052645.1 3193016..3194017(+) (pilW) [Acinetobacter pittii strain FDAARGOS_1217]
ATGGCTCACTCATTTGTATTATGGAAACAACGAGGCTTTACATTAATTGAGCTGATGGTTGCATTGGCTTTAGGTCTAAT
TTTAGTAGCCGCGGCGACTCAATTATTTATTGGTGGACTTCTATCAAGCCGTCTACAAAAAGCAAATGCTGAAATACAAG
ATAGCGGTATTTTTGGCTTGGAATATATTGCCCGTGATATACGCCTTCTAAATTATGGAAATGTAACCAACCCAATATTA
ACTGATACGACCCCTTGGGGCGGTGTTGTATTAACTGGTTCAACTGCAACCAATAACAACAATGTTAATTTTGTCCCTAA
CGTTGGAACAAATACCTATATTGCTGACACATTACTTAGTCGTGGTGCAGGTGATACGGTGAGTGCTGTGAGTAATCACT
GGAAAGGTCTTTCAAATATACAGAACACTTCAAATGCTGCTGTGCAAAGTGATCAGCTGACTATCCAATTTATTGCACCT
ACGAATATGACCAATTGTGAAGGTGTAAATGTACTTGCAGGTGACTTAATTGTAGAGCGTTATTTTTTACGTCTGGATAG
CAATGGTAGTTCCCAGCAAGATTATGCACTTGCATGTGATGCAAATACTCCCTCTACTGTAGCCACAGCTCAACCGACCA
CTGTTGCTGGGTTAGGCGACGCTGGTCAAATTGTATTGCCGCGTATTGATCATTTCCATGTGCTGTTTGGTGCAAAAAAT
GCGGCTGGCAATTTTGCTTATTATACCATTCCCCAATATCGCGCTGCTGCACAGGCTGCCCGAGATGCCACACCATCTGT
GATGCCGCCACGAATTCTTTCAATACAAATATCTGTATTAGCGCGCTCTACTAATAATGCCCAAAGCAAAGCAATAGATC
CTGAGCAATCTTTTTTTATGTTAGATCAAACCGTGCATGCTTCTGATAATACAACTCGATTCTTACGCCGCACTTATAAC
TTAACAATTGCTCTACGCAACGCGATGGGGGAAAGTCTATGA

Domains

Predicted by InterproScan.

Type IV Pilus-assembly protein W (PilW)

(181-327)

Prokaryotic N-terminal methylation motif (N_methyl)

(9-32)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilW Acinetobacter baumannii D1279779

84.985

100

0.85