Detailed information NTG0534737

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: I6K04_RS14630
• Genome accession: NZ_CP069442
• Coordinates: 3134282..3135595 (-)
• Length: 437 a.a.
• NCBI ID: WP_081526168.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain FDAARGOS_1274
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3129282..3140595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K04_RS14615 (I6K04_14615)	-	3130800..3132050 (-)	1251	WP_081526167.1	HlyD family secretion protein	-
I6K04_RS14620 (I6K04_14620)	-	3132566..3132742 (+)	177	WP_157760154.1	hypothetical protein	-
I6K04_RS14625 (I6K04_14625)	-	3132845..3134230 (+)	1386	WP_011133627.1	radical SAM/SPASM domain-containing protein	-
I6K04_RS14630 (I6K04_14630)	pilR	3134282..3135595 (-)	1314	WP_081526168.1	sigma-54-dependent transcriptional regulator	Regulator
I6K04_RS14635 (I6K04_14635)	-	3135588..3137144 (-)	1557	WP_045051037.1	two-component system sensor histidine kinase NtrB	-
I6K04_RS14640 (I6K04_14640)	parC	3137144..3139495 (-)	2352	WP_081526169.1	DNA topoisomerase IV subunit A	-
I6K04_RS14645 (I6K04_14645)	-	3139594..3140052 (+)	459	WP_043613280.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 47746.83 Da
• Isoelectric Point: 5.6281

>NTDB_id=534737 I6K04_RS14630 WP_081526168.1 3134282..3135595(-) (pilR) [Chromobacterium violaceum strain FDAARGOS_1274]
MTKTLRVLIVDDEPDIRELLELTLLKMGLAPVCAGSVAEARSALDAGGFDLALTDMRLPDGEGLEVVNHIGESGLDVPIA
VITAYGSADNAVRAMKAGAFDYLQKPVSLAQLRSLVKTALKVETPVRAAVQQRLLGESPAIQEVLRLMDKLSRSQAAVYI
GGESGTGKEQAARLIHELGPRADKPFVAVNCGAIPESLMESEFFGCRKGAFTGADADRDGFFQQAQGGTLFLDEVAELPL
AMQVKLLRAIQEKTVRKLGASQEEAVDARIICATHRDLAARVESGLFRQDLYYRLNVLPLRMPPLRELRDDIPLFAERLL
QRFGGASAPQLSADARRALQDYAYPGNFRELENILERAVALAAGPALSREDLQLTPCAEHAPEPGSGEPLQDYLDRVERE
AIVKALEGTRYNRTQAAKKLGVTFRSLRYRMERLGVK

Nucleotide

• Length: 1314 bp

>NTDB_id=534737 I6K04_RS14630 WP_081526168.1 3134282..3135595(-) (pilR) [Chromobacterium violaceum strain FDAARGOS_1274]
ATGACTAAGACACTGCGCGTATTGATCGTCGACGACGAACCGGACATCCGCGAACTGCTGGAACTGACCTTGCTGAAAAT
GGGCCTCGCCCCGGTATGCGCCGGCAGCGTGGCCGAGGCGCGTTCCGCGCTGGACGCGGGCGGATTCGACCTGGCGCTGA
CCGATATGCGGCTGCCTGACGGCGAGGGCTTGGAGGTGGTCAACCACATCGGCGAGTCCGGGCTGGATGTGCCCATCGCC
GTGATCACCGCCTACGGCAGCGCCGACAACGCGGTGCGGGCGATGAAGGCCGGCGCTTTCGACTACTTGCAGAAGCCGGT
CAGCCTGGCCCAGCTGCGCAGCCTGGTGAAGACGGCGCTGAAGGTGGAAACGCCGGTCCGCGCCGCCGTCCAGCAGCGGC
TGCTGGGCGAGTCGCCGGCGATACAGGAAGTGCTGCGGCTGATGGACAAGCTGTCGCGCAGCCAGGCCGCGGTGTACATC
GGCGGGGAGTCCGGCACCGGCAAGGAACAGGCTGCGCGGCTGATCCACGAACTGGGTCCGCGCGCCGACAAGCCCTTCGT
CGCCGTCAACTGCGGCGCGATCCCGGAAAGCCTGATGGAGAGCGAGTTCTTCGGCTGCCGCAAGGGCGCGTTCACCGGCG
CGGACGCCGACCGCGACGGCTTCTTCCAGCAGGCGCAGGGCGGCACCTTGTTCCTGGACGAAGTGGCCGAGCTGCCACTG
GCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGACCGTGCGCAAGCTGGGTGCCAGCCAGGAAGAGGCGGTCGA
TGCCCGCATCATCTGCGCCACCCACCGCGATCTGGCGGCGCGGGTGGAGTCCGGGCTGTTCCGCCAGGACCTGTACTACC
GCCTCAACGTGCTGCCGCTGAGAATGCCGCCGCTGCGCGAGCTGCGCGACGACATTCCGTTGTTCGCAGAGCGGCTGCTG
CAGCGCTTCGGCGGCGCGTCCGCGCCGCAGTTGTCCGCCGACGCCCGCCGCGCGCTGCAGGACTACGCCTACCCCGGCAA
TTTCCGCGAGCTGGAGAACATCCTGGAGCGGGCGGTGGCGCTGGCCGCCGGGCCCGCGCTGTCGCGCGAAGACCTGCAGC
TGACGCCCTGCGCCGAGCACGCGCCGGAGCCCGGCAGCGGCGAGCCGCTGCAGGACTACCTGGACCGAGTCGAGCGCGAG
GCCATCGTCAAGGCGCTGGAGGGCACCCGCTACAACCGCACCCAGGCCGCTAAGAAACTGGGGGTCACCTTCCGCTCGCT
GCGTTACCGGATGGAGCGGCTGGGCGTGAAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-116)

• Bacterial regulatory protein, Fis family (HTH_8) (394-433)

• Sigma-54 interaction domain (Sigma54_activat) (134-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.318	100	0.597
pilR	Acinetobacter baumannii strain A118	44.978	100	0.471
luxO	Vibrio cholerae strain A1552	39.952	95.652	0.382