Detailed information NTG0534405

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JR311_RS17445
• Genome accession: NZ_CP069391
• Coordinates: 3552131..3553294 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Sam8H1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3547131..3558294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JR311_RS17415 (JR311_17415)	-	3547396..3547815 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
JR311_RS17420 (JR311_17420)	comFC	3547889..3548578 (-)	690	WP_204530637.1	phosphoribosyltransferase family protein	Machinery gene
JR311_RS17425 (JR311_17425)	-	3548584..3548868 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
JR311_RS17430 (JR311_17430)	comFA	3548926..3550311 (-)	1386	WP_156735506.1	DEAD/DEAH box helicase	Machinery gene
JR311_RS17435 (JR311_17435)	-	3550419..3551267 (-)	849	WP_156735505.1	DegV family protein	-
JR311_RS17440 (JR311_17440)	degU	3551365..3552054 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JR311_RS17445 (JR311_17445)	degS	3552131..3553294 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
JR311_RS17450 (JR311_17450)	-	3553517..3554164 (+)	648	WP_060657503.1	YigZ family protein	-
JR311_RS17455 (JR311_17455)	-	3554169..3555344 (+)	1176	WP_165409305.1	LCP family protein	-
JR311_RS17460 (JR311_17460)	-	3555434..3556510 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
JR311_RS17465 (JR311_17465)	tuaH	3556643..3557839 (-)	1197	WP_204529992.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=534405 JR311_RS17445 WP_003151385.1 3552131..3553294(-) (degS) [Bacillus velezensis strain Sam8H1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=534405 JR311_RS17445 WP_003151385.1 3552131..3553294(-) (degS) [Bacillus velezensis strain Sam8H1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGGGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948