Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   JR311_RS03105 Genome accession   NZ_CP069391
Coordinates   614840..614959 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain Sam8H1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 609840..619959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR311_RS03090 (JR311_03090) - 611452..612135 (+) 684 WP_014416901.1 response regulator transcription factor -
  JR311_RS03095 (JR311_03095) - 612122..613555 (+) 1434 WP_162262652.1 sensor histidine kinase -
  JR311_RS03100 (JR311_03100) rapC 613708..614856 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  JR311_RS03105 (JR311_03105) phrC 614840..614959 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  JR311_RS03110 (JR311_03110) - 615108..615218 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  JR311_RS03115 (JR311_03115) - 615298..616662 (-) 1365 WP_156735927.1 aspartate kinase -
  JR311_RS03120 (JR311_03120) ceuB 617077..618030 (+) 954 WP_003156332.1 ABC transporter permease Machinery gene
  JR311_RS03125 (JR311_03125) - 618020..618967 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  JR311_RS03130 (JR311_03130) - 618961..619719 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=534348 JR311_RS03105 WP_003156334.1 614840..614959(+) (phrC) [Bacillus velezensis strain Sam8H1]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=534348 JR311_RS03105 WP_003156334.1 614840..614959(+) (phrC) [Bacillus velezensis strain Sam8H1]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718