Detailed information NTG0534137

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: JN757_RS20650
• Genome accession: NZ_CP069352
• Coordinates: 4739702..4741936 (-)
• Length: 744 a.a.
• NCBI ID: WP_203419026.1
• Uniprot ID: -
• Organism: Pseudomonas granadensis isolate CT364
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4734702..4746936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JN757_RS20615 (JN757_20605)	murB	4735079..4736098 (-)	1020	WP_203419018.1	UDP-N-acetylmuramate dehydrogenase	-
JN757_RS20620 (JN757_20610)	-	4736095..4736559 (-)	465	WP_203419019.1	low molecular weight protein-tyrosine-phosphatase	-
JN757_RS20625 (JN757_20615)	kdsB	4736559..4737323 (-)	765	WP_203419021.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
JN757_RS20630 (JN757_20620)	-	4737320..4737505 (-)	186	WP_003179363.1	Trm112 family protein	-
JN757_RS20635 (JN757_20625)	lpxK	4737530..4738540 (-)	1011	WP_203419023.1	tetraacyldisaccharide 4'-kinase	-
JN757_RS20640 (JN757_20630)	-	4738540..4738968 (-)	429	WP_090285229.1	biopolymer transporter ExbD	-
JN757_RS20645 (JN757_20635)	exbB	4738965..4739600 (-)	636	WP_203419025.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
JN757_RS20650 (JN757_20640)	comA	4739702..4741936 (-)	2235	WP_203419026.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JN757_RS20655 (JN757_20645)	-	4742073..4742591 (+)	519	WP_203419028.1	DUF2062 domain-containing protein	-
JN757_RS20660 (JN757_20650)	-	4743419..4744198 (-)	780	WP_039760202.1	ABC transporter permease	-
JN757_RS20665 (JN757_20655)	-	4744195..4745127 (-)	933	WP_203419030.1	ABC transporter ATP-binding protein	-
JN757_RS20670 (JN757_20660)	-	4745261..4745884 (-)	624	WP_203419032.1	glutathione S-transferase	-
JN757_RS20675 (JN757_20665)	-	4745928..4746587 (-)	660	WP_203419034.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81971.22 Da
• Isoelectric Point: 10.3049

>NTDB_id=534137 JN757_RS20650 WP_203419026.1 4739702..4741936(-) (comA) [Pseudomonas granadensis isolate CT364]
MRTGMMALAVGLLAPVFMPALPPVWLMLLMPVVALMLLPFRSYPLACVLFGFAWSSVAAQWALDDRLALKLDGETRWLEG
RVVGLPQDREGVVRFELVDARSRHEKLPARMRLAWYAGPAVNSGERWRLAVKLKRPGGLRNPDAFDFEAWLLAQRIGATG
TIKDGQRLSEARWAWRDSIRQRLLGVDAQGRNGALAALVLGDGSGLSREDWQILQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLARYGLWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVGLVLLWRLRFRHLGAWWPLLLAFNGVLLLDPL
ASLRPGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALNLPISVSGPLANLLAVPWVSLVVLPPAL
LGTLLLPLPYVGEGLLWLAGGLIDWLFRGLAVIAGQWPAWIPGSLPIGVWLLGSLGAVLLLLPRGVPLRPLGWPLLLLLA
LPPRERLTEGIADVWQLDVGQGLAILIRTRHHTLLYDAGPRFGEFDIGERVVVPALRKLRVEKLDMMLLSHADADHAGGA
LAVSRGLPVDRVISGDPEGLPQQLSAAACESGQQWQWDGVSFQLWQWAAAHDSNQRSCVLQIEANGERLLLTGDIDSHAE
RVLLDGPLAVPTPWLQAPHHGSRSSSSMALLKALQPHSVLISRGHGNSFGHPHPTVLARYRKQQLRIYDSAEHGAIHLQL
GTFQPAHTLRHQRRFWRDPPALAR

Nucleotide

• Length: 2235 bp

>NTDB_id=534137 JN757_RS20650 WP_203419026.1 4739702..4741936(-) (comA) [Pseudomonas granadensis isolate CT364]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTTTGCTGGCCCCGGTTTTTATGCCGGCGTTACCGCCGGTCTGGTTGAT
GCTGTTGATGCCGGTGGTGGCGCTGATGCTGTTGCCGTTTCGCAGTTATCCGTTGGCGTGCGTGCTGTTCGGGTTCGCCT
GGAGCAGCGTCGCGGCGCAGTGGGCTCTGGATGATCGCTTGGCGCTGAAGCTTGATGGTGAAACCCGCTGGCTTGAAGGA
CGCGTCGTCGGGCTGCCGCAAGACCGCGAGGGCGTGGTGCGCTTCGAGTTGGTTGATGCGCGGTCGCGGCACGAAAAACT
GCCGGCGCGAATGCGCCTGGCCTGGTACGCCGGGCCAGCGGTCAACAGCGGCGAGCGTTGGCGTCTGGCGGTGAAGCTCA
AGCGCCCGGGTGGCTTGCGCAATCCCGATGCCTTCGATTTCGAGGCCTGGCTGCTGGCGCAACGCATCGGCGCGACTGGC
ACGATCAAGGATGGCCAACGCCTGAGCGAGGCGCGCTGGGCCTGGCGTGACAGCATTCGGCAGCGTTTGCTGGGAGTGGA
TGCGCAAGGCCGCAACGGCGCGTTGGCCGCGTTGGTGCTGGGCGATGGTTCCGGGCTGAGTCGCGAGGACTGGCAGATCC
TGCAGGACACCGGCACCGTGCACTTGCTGGTGATTTCCGGTCAGCACATCGGTCTGCTGGCGGCGGTGATGTACCTGCTC
GTCGCCGGGCTGGCGCGGTATGGGCTGTGGCCGCTGCGCTGGCCGTGGTTGCCTTGGGCCTGTGGCCTGGCCTTCGCGGC
GGCGCTGGGTTATGGCCTGCTCGCCGGGTTCGATGTGCCGGTGCAGCGGGCCTGCGTGATGGTCGGGCTGGTGCTGTTAT
GGCGTCTGCGTTTTCGCCATCTCGGGGCGTGGTGGCCGCTGTTGCTGGCGTTCAACGGCGTGTTGTTGCTCGACCCGCTG
GCCAGTCTGCGTCCGGGGTTCTGGCTGTCGTTCGCGGCTGTGGCGGTGTTGATCTTTACCTTCGGCGGTCGTCTCGGCGC
CTGGCGCTGGTGGCAGACCTGGACACGCGCGCAATGGCTGATCGCAATCGGCCTGTGCCCGGTGCTGCTGGCGCTGAATC
TGCCGATCAGCGTGAGCGGGCCGTTGGCCAACCTGCTCGCGGTGCCCTGGGTGAGTCTGGTGGTGTTGCCGCCGGCGTTG
CTCGGGACGCTGTTGTTACCGTTGCCGTATGTCGGCGAAGGCTTGCTGTGGCTGGCGGGTGGCTTGATCGATTGGCTGTT
TCGCGGGCTCGCGGTGATTGCCGGGCAATGGCCGGCGTGGATTCCCGGCTCGCTACCCATCGGGGTCTGGCTGCTGGGCA
GTCTCGGCGCGGTTCTCCTGCTGTTGCCGCGAGGGGTGCCGCTGCGTCCGCTGGGCTGGCCGCTGCTGTTACTGCTGGCG
CTGCCGCCGCGCGAGCGACTGACGGAAGGCATCGCCGATGTCTGGCAGCTGGACGTGGGTCAAGGTCTGGCGATCCTGAT
TCGCACACGGCATCACACGCTGCTGTACGACGCCGGGCCGCGCTTTGGTGAGTTTGATATCGGCGAGCGCGTGGTAGTGC
CCGCGTTGCGCAAACTGCGCGTGGAAAAACTCGACATGATGCTGCTCAGCCACGCCGACGCCGATCACGCCGGGGGGGCG
CTGGCAGTCTCCCGTGGTTTGCCGGTCGATCGCGTGATCAGTGGCGACCCGGAGGGGCTACCTCAACAGTTGAGCGCCGC
TGCCTGTGAGTCCGGGCAGCAATGGCAGTGGGACGGGGTCAGTTTTCAGCTCTGGCAATGGGCAGCAGCCCACGACAGCA
ATCAACGCTCTTGCGTATTGCAGATCGAGGCTAACGGCGAGCGTCTGTTATTGACCGGTGATATCGACAGTCACGCCGAA
CGGGTCCTGCTCGACGGACCGCTGGCGGTGCCGACGCCATGGCTGCAAGCACCGCATCACGGCAGCCGCAGCTCATCGTC
GATGGCGCTGCTCAAGGCACTGCAACCGCACTCGGTACTGATTTCTCGCGGCCACGGCAATTCCTTCGGTCATCCGCATC
CGACGGTGCTGGCGCGCTACCGCAAACAGCAACTGCGCATCTACGACAGCGCCGAACACGGCGCCATTCATTTGCAACTG
GGCACCTTCCAGCCCGCGCACACCCTGCGTCACCAAAGACGCTTCTGGCGTGATCCGCCGGCGCTGGCCCGCTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.57	96.237	0.602
comA	Ralstonia pseudosolanacearum GMI1000	33.768	100	0.383