Detailed information NTG0053404

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: U722_RS13615
• Genome accession: NC_023073
• Coordinates: 2881143..2882147 (-)
• Length: 334 a.a.
• NCBI ID: WP_003152385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens LFB112
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2876143..2887147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U722_RS13590 (U722_14500)	-	2877106..2877738 (+)	633	WP_003152390.1	GNAT family N-acetyltransferase	-
U722_RS13595 (U722_14505)	-	2877763..2878407 (+)	645	WP_003152389.1	acetoin utilization AcuB family protein	-
U722_RS13600 (U722_14510)	-	2878404..2879570 (+)	1167	WP_014305595.1	acetoin utilization protein AcuC	-
U722_RS13605 (U722_14515)	motS	2879580..2880269 (-)	690	WP_003152387.1	flagellar motor protein MotS	-
U722_RS13610 (U722_14520)	motP	2880259..2881074 (-)	816	WP_003152386.1	flagellar motor protein MotP	-
U722_RS13615 (U722_14525)	ccpA	2881143..2882147 (-)	1005	WP_003152385.1	catabolite control protein A	Regulator
U722_RS13620 (U722_14530)	-	2882427..2883503 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
U722_RS13625 (U722_14535)	ytxJ	2883739..2884065 (-)	327	WP_003152382.1	bacillithiol system redox-active protein YtxJ	-
U722_RS13630 (U722_14540)	-	2884091..2884504 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
U722_RS13635 (U722_14545)	-	2884537..2884959 (-)	423	WP_003152378.1	DUF948 domain-containing protein	-
U722_RS13640 (U722_14550)	murC	2885115..2886413 (-)	1299	WP_003152377.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36963.29 Da
• Isoelectric Point: 4.9206

>NTDB_id=53404 U722_RS13615 WP_003152385.1 2881143..2882147(-) (ccpA) [Bacillus amyloliquefaciens LFB112]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=53404 U722_RS13615 WP_003152385.1 2881143..2882147(-) (ccpA) [Bacillus amyloliquefaciens LFB112]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACAACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCGGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATCTTAAGCAACTCGGATCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCTGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATTGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACTTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503