Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   JOJ89_RS21175 Genome accession   NZ_CP069296
Coordinates   3414666..3415994 (-) Length   442 a.a.
NCBI ID   WP_234703445.1    Uniprot ID   -
Organism   Metabacillus sp. cB07     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3409666..3420994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOJ89_RS17500 - 3409945..3410604 (+) 660 WP_029566630.1 DNA alkylation repair protein -
  JOJ89_RS17505 - 3410653..3411222 (-) 570 WP_029566631.1 GNAT family N-acetyltransferase -
  JOJ89_RS17510 - 3411247..3411639 (-) 393 WP_029284041.1 hotdog fold thioesterase -
  JOJ89_RS17515 - 3411653..3412714 (-) 1062 WP_242524627.1 PQQ-dependent sugar dehydrogenase -
  JOJ89_RS17520 - 3412975..3413673 (-) 699 WP_029566633.1 SIMPL domain-containing protein -
  JOJ89_RS17525 comA 3413944..3414585 (-) 642 WP_029284047.1 response regulator transcription factor Regulator
  JOJ89_RS21175 comP 3414666..3415994 (-) 1329 WP_234703445.1 sensor histidine kinase Regulator
  JOJ89_RS17535 comX 3416992..3417153 (-) 162 WP_081414235.1 competence pheromone ComX -
  JOJ89_RS17540 - 3417157..3418083 (-) 927 WP_203288682.1 polyprenyl synthetase family protein -
  JOJ89_RS17545 degQ 3418230..3418370 (-) 141 WP_029284053.1 degradation enzyme regulation protein DegQ Regulator
  JOJ89_RS17550 - 3418598..3418825 (-) 228 WP_203288683.1 hypothetical protein -
  JOJ89_RS17555 - 3418939..3419541 (-) 603 WP_203288684.1 pyroglutamyl-peptidase I -
  JOJ89_RS17560 - 3419643..3420545 (-) 903 WP_203290377.1 aldo/keto reductase -

Sequence


Protein


Download         Length: 442 a.a.        Molecular weight: 50547.56 Da        Isoelectric Point: 6.5094

>NTDB_id=533426 JOJ89_RS21175 WP_234703445.1 3414666..3415994(-) (comP) [Metabacillus sp. cB07]
MATKIYDIEFILGRVRYYSLLAVLPTIVLVAITTLIKEDNPTFYPVKLSIFIYITMLVVFYIKEILDFRFRFKRFSEKYN
YQDSIFKYTQSIRKASKLDQVISELKEVITDVLLVSRASYVEVNKDGAIVSVDIQMKGSDYLLYEKEIRKASHEIGKIVE
VDRGFVINVGETDERSFVMVCLSMLNTPKLNRDEISWLKTLSFYTNISLENFLKIEELMSHLQKIKSEGSNPAWLTKVLF
SIEEKQRSNLAKDLHDSVLQDLISLKRQCELALAELQAAPAVFTDQLQDMNSSMTNIIKTTRETCQELRPQLLYDLGLVK
ALQKLAAQYNETAPFDVRLNAGNFTKSIDIDTQLNLYRIVQELLTNAGKHSNAMHVLIMLVCIKDKIVLHYEDDGIGFDQ
NELYTNHQSMGLSGIAERVKALNGTHSIETSKGNGFKVVVEI

Nucleotide


Download         Length: 1329 bp        

>NTDB_id=533426 JOJ89_RS21175 WP_234703445.1 3414666..3415994(-) (comP) [Metabacillus sp. cB07]
ATGGCTACTAAAATTTATGATATTGAGTTTATTTTGGGAAGGGTAAGGTATTATTCATTATTGGCCGTTCTGCCGACAAT
TGTATTAGTGGCAATTACGACGTTAATTAAAGAGGATAATCCTACTTTCTACCCCGTTAAACTCTCAATCTTCATCTATA
TAACAATGCTGGTTGTCTTCTACATCAAAGAAATTCTCGATTTCCGCTTCCGGTTTAAGCGTTTTTCGGAGAAGTACAAC
TATCAGGACAGTATCTTTAAATATACGCAGAGCATCCGTAAAGCGAGCAAGCTGGATCAGGTCATCAGCGAGCTGAAAGA
GGTTATTACAGATGTCCTGCTTGTCAGCAGGGCAAGCTATGTGGAAGTAAATAAAGATGGGGCTATTGTTTCGGTTGATA
TTCAGATGAAAGGGTCTGATTATCTCCTGTATGAAAAAGAGATAAGGAAAGCATCGCATGAGATCGGGAAGATCGTTGAA
GTGGACAGGGGTTTTGTGATTAATGTGGGGGAGACAGACGAGCGCAGTTTTGTGATGGTCTGCCTGTCCATGCTCAATAC
GCCAAAGCTCAACAGGGATGAGATTTCATGGCTGAAGACCCTTTCTTTCTATACGAATATTTCCCTTGAAAACTTCCTTA
AGATTGAAGAACTGATGAGCCATCTCCAGAAGATCAAAAGCGAAGGCAGCAATCCGGCCTGGCTGACTAAGGTGCTCTTT
TCCATCGAGGAAAAACAGCGCTCTAATCTCGCTAAGGATCTGCACGATTCTGTTCTTCAGGATTTGATTTCACTGAAGCG
CCAGTGTGAGCTGGCACTGGCTGAGCTCCAGGCTGCCCCGGCTGTTTTTACGGACCAGCTTCAGGATATGAACAGTTCGA
TGACGAATATTATTAAAACGACCCGTGAAACCTGCCAGGAGCTTCGGCCGCAGCTGCTGTATGATCTGGGCCTCGTTAAG
GCGCTTCAGAAGCTTGCTGCCCAGTACAATGAAACGGCACCGTTTGATGTCAGGCTCAATGCCGGCAACTTCACAAAATC
GATTGATATTGACACCCAGCTGAACTTGTACCGCATTGTCCAGGAGCTTCTTACCAATGCCGGCAAGCATTCGAATGCCA
TGCATGTGCTGATTATGCTTGTCTGTATCAAGGATAAAATCGTTCTGCATTATGAGGACGATGGAATTGGCTTTGACCAG
AACGAATTGTACACCAATCATCAGAGTATGGGGCTCTCTGGAATTGCTGAACGGGTTAAAGCGCTGAATGGGACCCACTC
TATTGAGACGTCAAAGGGCAACGGGTTTAAAGTTGTCGTAGAGATTTAA

Domains


Predicted by InterproScan.

(247-313)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.072

100

0.586