Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   JOF24_RS14890 Genome accession   NZ_CP069214
Coordinates   3046590..3047528 (-) Length   312 a.a.
NCBI ID   WP_020954300.1    Uniprot ID   -
Organism   Bacillus velezensis strain GUAL210     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3041590..3052528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOF24_RS14855 - 3041808..3042284 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  JOF24_RS14860 - 3042284..3042568 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  JOF24_RS14865 mnhG 3042552..3042926 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  JOF24_RS14870 - 3042966..3043349 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  JOF24_RS14875 comA 3043371..3044015 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  JOF24_RS14880 - 3044096..3046394 (-) 2299 Protein_2889 histidine kinase -
  JOF24_RS14885 comX 3046414..3046590 (-) 177 WP_007408675.1 competence pheromone ComX -
  JOF24_RS14890 comQ 3046590..3047528 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  JOF24_RS14895 degQ 3047659..3047799 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JOF24_RS14900 - 3048265..3048606 (+) 342 WP_015418107.1 hypothetical protein -
  JOF24_RS14905 - 3048613..3049836 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  JOF24_RS14910 - 3049966..3051432 (-) 1467 WP_015418109.1 nicotinate phosphoribosyltransferase -
  JOF24_RS14915 - 3051450..3052001 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  JOF24_RS14920 - 3052098..3052496 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 312 a.a.        Molecular weight: 35893.29 Da        Isoelectric Point: 6.3951

>NTDB_id=532990 JOF24_RS14890 WP_020954300.1 3046590..3047528(-) (comQ) [Bacillus velezensis strain GUAL210]
MKTIIEQMCLDANQIKNKMKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLS
ADIIDDLEDEDNKQALWMKIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLE
VIRLKCGSLFALSNVAGTMLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKL
VRMFSHRETHLKFISDKNNFIQTLTDAGVTQYVSVLHQLYKQKCENAIEKLNLETSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 939 bp        

>NTDB_id=532990 JOF24_RS14890 WP_020954300.1 3046590..3047528(-) (comQ) [Bacillus velezensis strain GUAL210]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAAAATGAAGAGTATAATAGAGCAAAACAT
ATTTAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATATTTAACCTTTGCTGAATCTGCTTTAT
TGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGGCGGGAATTGAAATTCTTACGCTTTCC
GCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATGAAGATAGACCGTTCAGAAGCTTTAAG
CGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACATGAATCCTTTTATTCTTTCTTACATAC
TGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGCCAGAGAAAGAAGATGAAAGTTTAGAG
GTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACTATGTTAGCAACTGGAAAGTATAATGA
AACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGATTATCTGGCTCTTTTCAGCTCTAAAC
GCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGCTGTTTAACGAGCCTTCTGAAAAATTG
GTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAACAATTTTATTCAGACATTAACTGATGC
AGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGAAAATGCTATAGAGAAACTAAATCTTG
AAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAGTATAA

Domains


Predicted by InterproScan.

(53-247)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.456

91.346

0.571