Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   JOF24_RS14875 Genome accession   NZ_CP069214
Coordinates   3043371..3044015 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain GUAL210     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3038371..3049015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOF24_RS14840 - 3039556..3039987 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  JOF24_RS14845 - 3039987..3040328 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  JOF24_RS14850 - 3040321..3041802 (+) 1482 WP_032876804.1 Na+/H+ antiporter subunit D -
  JOF24_RS14855 - 3041808..3042284 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  JOF24_RS14860 - 3042284..3042568 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  JOF24_RS14865 mnhG 3042552..3042926 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  JOF24_RS14870 - 3042966..3043349 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  JOF24_RS14875 comA 3043371..3044015 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  JOF24_RS14880 - 3044096..3046394 (-) 2299 Protein_2889 histidine kinase -
  JOF24_RS14885 comX 3046414..3046590 (-) 177 WP_007408675.1 competence pheromone ComX -
  JOF24_RS14890 comQ 3046590..3047528 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  JOF24_RS14895 degQ 3047659..3047799 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JOF24_RS14900 - 3048265..3048606 (+) 342 WP_015418107.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=532989 JOF24_RS14875 WP_003152052.1 3043371..3044015(-) (comA) [Bacillus velezensis strain GUAL210]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=532989 JOF24_RS14875 WP_003152052.1 3043371..3044015(-) (comA) [Bacillus velezensis strain GUAL210]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCTAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCACGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACATCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCAATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864