Detailed information NTG0532901

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: LA346_RS03470
• Genome accession: NZ_CP083627
• Coordinates: 644450..645349 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FDAARGOS_1508
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 639450..650349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA346_RS03445 (LA346_03445)	rsmA	639780..640652 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
LA346_RS03450 (LA346_03450)	-	640783..641091 (-)	309	WP_000333257.1	hypothetical protein	-
LA346_RS03455 (LA346_03455)	-	641084..641725 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
LA346_RS03460 (LA346_03460)	-	641727..643757 (-)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
LA346_RS03465 (LA346_03465)	-	643834..644130 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
LA346_RS03470 (LA346_03470)	comR	644450..645349 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
LA346_RS03475 (LA346_03475)	rnmV	645421..645981 (-)	561	WP_000664448.1	ribonuclease M5	-
LA346_RS03480 (LA346_03480)	-	645981..646754 (-)	774	WP_000575638.1	TatD family hydrolase	-
LA346_RS03485 (LA346_03485)	-	647059..648030 (-)	972	Protein_678	DUF1542 domain-containing protein	-
LA346_RS03490 (LA346_03490)	rpmH	648236..648370 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
LA346_RS03495 (LA346_03495)	-	648515..649729 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
LA346_RS03500 (LA346_03500)	-	649885..650179 (-)	295	Protein_681	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=532901 LA346_RS03470 WP_000904833.1 644450..645349(-) (comR) [Streptococcus pneumoniae strain FDAARGOS_1508]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=532901 LA346_RS03470 WP_000904833.1 644450..645349(-) (comR) [Streptococcus pneumoniae strain FDAARGOS_1508]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361