Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   LAJ61_RS05510 Genome accession   NZ_CP083409
Coordinates   1254971..1256200 (+) Length   409 a.a.
NCBI ID   WP_224053120.1    Uniprot ID   -
Organism   Moraxella osloensis strain FLMOS1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1249971..1261200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAJ61_RS05480 (LAJ61_05460) - 1250091..1250837 (-) 747 WP_224054765.1 glutathione peroxidase -
  LAJ61_RS05485 (LAJ61_05465) - 1251117..1251605 (+) 489 WP_224054766.1 YajQ family cyclic di-GMP-binding protein -
  LAJ61_RS05490 (LAJ61_05470) - 1251630..1252157 (+) 528 WP_224054767.1 hypothetical protein -
  LAJ61_RS05495 (LAJ61_05475) hisB 1252168..1252770 (-) 603 WP_007117432.1 imidazoleglycerol-phosphate dehydratase HisB -
  LAJ61_RS05500 (LAJ61_05480) def 1252793..1253323 (-) 531 WP_135887808.1 peptide deformylase -
  LAJ61_RS05505 (LAJ61_05485) tsaP 1253698..1254801 (+) 1104 WP_224053119.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  LAJ61_RS05510 (LAJ61_05490) dprA 1254971..1256200 (+) 1230 WP_224053120.1 DNA-processing protein DprA Machinery gene
  LAJ61_RS05515 (LAJ61_05495) - 1256250..1256855 (+) 606 WP_224053121.1 L-threonylcarbamoyladenylate synthase -
  LAJ61_RS05520 (LAJ61_05500) grpE 1257080..1257661 (+) 582 WP_144918615.1 nucleotide exchange factor GrpE -
  LAJ61_RS05525 (LAJ61_05505) dnaK 1257823..1259745 (+) 1923 WP_224053122.1 molecular chaperone DnaK -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 44708.20 Da        Isoelectric Point: 6.7814

>NTDB_id=532095 LAJ61_RS05510 WP_224053120.1 1254971..1256200(+) (dprA) [Moraxella osloensis strain FLMOS1]
MQDYQPNLNPAQQAALLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASRTSQFLHDTL
LELSHGQYGVVFDNDPLYPSQLKNIYDPPPLLLYQGNLSALSQPQLAIVGSRKPSPHAEKIAFDMAQYLAHEGLWITSGM
AEGIDKQAHLGALSLQMTGTQGGTIAVLGNGIKHCYPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLS
LATLVVEAAAKSGSLITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLVDHPSQILEDLSIFKSPLVKATEVETT
PIVAQSVISSPQLPSESASNTQPHQAPLAMDVAPHLQTLLNQLDWVGQDLDNLVDKTRTDIATLMGWLIELELMGLVMQR
GGLYMRCRP

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=532095 LAJ61_RS05510 WP_224053120.1 1254971..1256200(+) (dprA) [Moraxella osloensis strain FLMOS1]
ATGCAGGATTATCAGCCTAACTTAAACCCGGCGCAGCAGGCTGCCTTATTGTTATGGCATTTAGTGAACTTATCGGTGCC
GGTTTATAACAAGCTTGTAGCGCGTTTTGGTAGCGCTGAACAAGCCATTCAAGCCAAGCTGGCAGACTGGCAAGCACTGG
GATTGCATGATAATCACCACAAACGTTTTGCTGAGTTTATCAGCGCCAGTCGAACCAGCCAGTTTTTGCATGATACGCTA
TTAGAACTATCGCACGGGCAGTATGGAGTGGTGTTTGATAATGATCCTTTATATCCGTCGCAGTTAAAAAACATCTATGA
CCCACCCCCTTTGCTATTGTATCAAGGCAACTTATCTGCCTTAAGCCAACCACAATTGGCGATCGTTGGAAGTCGTAAAC
CTAGCCCACATGCCGAAAAAATTGCTTTTGATATGGCGCAATATTTGGCGCACGAAGGTTTATGGATCACCAGTGGCATG
GCAGAAGGCATTGACAAACAAGCGCATTTAGGTGCGTTAAGTCTACAGATGACGGGTACACAAGGTGGTACTATTGCGGT
ACTGGGCAATGGTATTAAACATTGTTATCCAAAAAATCACGCCAGTCTTAAAGCCCATATTATTGCGTCAGGTGGCTGCG
TCATTAGTGAATTATTGCCCGATATGCCGAGCAATCGCTACCATTTTCCAAGGCGCAATCGTCTCGTCGCTGGGCTAAGT
TTGGCAACTTTGGTTGTAGAAGCGGCTGCAAAAAGCGGCTCGCTCATTACGGCCAGAGAAGCCAACGAGCAAGGCAAACA
AGTTTTTGCTATTCCTAGTCATATTGACAACCTCAACGCCAAAGGTTGCCACCAATTGATTCGTGAGGGTGCGACCTTAG
TCGATCATCCATCACAAATTTTGGAAGATTTATCAATTTTTAAATCGCCGCTTGTCAAAGCCACCGAGGTTGAAACAACG
CCGATAGTTGCACAGTCAGTCATCAGTAGCCCTCAATTACCATCCGAATCAGCATCAAATACCCAGCCGCACCAAGCGCC
ATTGGCGATGGATGTGGCGCCGCATTTGCAGACACTACTTAATCAACTCGATTGGGTCGGGCAAGATTTAGACAACTTGG
TCGATAAAACCCGTACCGATATTGCCACACTCATGGGCTGGCTGATTGAGCTTGAGCTAATGGGACTGGTGATGCAGCGC
GGCGGTCTATACATGCGCTGCCGCCCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

44.03

98.289

0.433

  dprA Acinetobacter baylyi ADP1

45.153

95.844

0.433

  dprA Acinetobacter baumannii D1279779

44.304

96.577

0.428