Detailed information NTG0532018

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: LAE73_RS07930
• Genome accession: NZ_CP083379
• Coordinates: 1487616..1489589 (+)
• Length: 657 a.a.
• NCBI ID: WP_057037150.1
• Uniprot ID: -
• Organism: Campylobacter coli strain C203115
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1482616..1494589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LAE73_RS07900 (LAE73_07870)	flgH	1482804..1483502 (+)	699	WP_002787400.1	flagellar basal body L-ring protein FlgH	-
LAE73_RS07905 (LAE73_07875)	ispG	1483586..1484659 (-)	1074	WP_002776443.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
LAE73_RS07910 (LAE73_07880)	-	1484719..1486557 (-)	1839	WP_002776439.1	primosomal protein N'	-
LAE73_RS07915 (LAE73_07885)	Cj0683	1486554..1487000 (-)	447	WP_002776437.1	type II secretion system protein	Machinery gene
LAE73_RS07920 (LAE73_07890)	-	1486997..1487242 (-)	246	WP_002776428.1	hypothetical protein	-
LAE73_RS07925 (LAE73_07895)	-	1487232..1487462 (-)	231	WP_002776426.1	hypothetical protein	-
LAE73_RS07930 (LAE73_07900)	uvrB	1487616..1489589 (+)	1974	WP_057037150.1	excinuclease ABC subunit UvrB	Machinery gene
LAE73_RS07935 (LAE73_07905)	-	1489624..1491048 (-)	1425	WP_002776421.1	anaerobic C4-dicarboxylate transporter	-
LAE73_RS07940 (LAE73_07910)	-	1491235..1492485 (-)	1251	WP_002776420.1	RNA polymerase factor sigma-54	-
LAE73_RS07945 (LAE73_07915)	lptB	1492485..1493213 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
LAE73_RS07950 (LAE73_07920)	tsaE	1493206..1493613 (-)	408	WP_057037151.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
LAE73_RS07955 (LAE73_07925)	-	1493610..1493855 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 75997.40 Da
• Isoelectric Point: 6.4586

>NTDB_id=532018 LAE73_RS07930 WP_057037150.1 1487616..1489589(+) (uvrB) [Campylobacter coli strain C203115]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLASTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKIEKMPANERTKIVKELRKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=532018 LAE73_RS07930 WP_057037150.1 1487616..1489589(+) (uvrB) [Campylobacter coli strain C203115]
ATGTTAGAACTTACAAGCGATTTTAAACCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCAACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATGAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGATATTTATCCTGCTTATTACGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGTGATGAACTGGATGCAATGTATCATTATAATGTTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTT
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATACCAACGCCTTAAACAACGCGTTGAATTTGATCTTGAAATGC
TTGCAAGCACAGGGATGTGCAAAGGGGTTGAAAACTATGCTAGACATTTAACAGGGCTTAAAGAAGGCGATACGCCTTAT
ACACTTTTTGATTATTTTGCTATTAAAAATAGGAAATTTCTTGTTATTGTAGACGAAAGCCATGTTTCTTTACCACAATT
TCGCGGTATGTTTGCAGGAGATAGAAGTAGAAAGCAAACTTTAGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTGTTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAAATTG
AAAAAATGCCTGCTAATGAAAGAACTAAAATCGTAAAAGAGCTTCGTAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (623-656)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

• Ultra-violet resistance protein B (UvrB) (552-593)

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• UvrB interaction domain (UvrB_inter) (158-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	50.457	99.848	0.504
uvrB	Streptococcus pneumoniae R6	50.457	99.848	0.504
uvrB	Streptococcus pneumoniae D39	50.457	99.848	0.504