Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DI291_RS17100 Genome accession   NZ_CP068988
Coordinates   3380050..3382362 (-) Length   770 a.a.
NCBI ID   WP_128823062.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain SUBG0010     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3375050..3387362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DI291_RS17060 (DI291_17570) - 3375516..3375947 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  DI291_RS17065 (DI291_17575) - 3375947..3376288 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  DI291_RS17070 (DI291_17580) - 3376281..3377759 (+) 1479 WP_023856152.1 Na+/H+ antiporter subunit D -
  DI291_RS17075 (DI291_17585) - 3377765..3378241 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  DI291_RS17080 (DI291_17590) - 3378241..3378525 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  DI291_RS17085 (DI291_17595) mnhG 3378509..3378883 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  DI291_RS17090 (DI291_17600) - 3378919..3379308 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  DI291_RS17095 (DI291_17605) comA 3379325..3379963 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  DI291_RS17100 (DI291_17610) comP 3380050..3382362 (-) 2313 WP_128823062.1 ATP-binding protein Regulator
  DI291_RS17105 (DI291_0685) comX 3382374..3382547 (-) 174 WP_080131484.1 competence pheromone ComX -
  DI291_RS17110 (DI291_17620) - 3382551..3383432 (-) 882 WP_128823060.1 polyprenyl synthetase family protein -
  DI291_RS17115 (DI291_17625) degQ 3383619..3383759 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  DI291_RS17120 (DI291_17635) - 3384245..3384592 (+) 348 WP_224146417.1 SDR family oxidoreductase -
  DI291_RS17125 (DI291_17640) - 3384635..3385855 (-) 1221 WP_020452793.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 88478.68 Da        Isoelectric Point: 6.7193

>NTDB_id=531864 DI291_RS17100 WP_128823062.1 3380050..3382362(-) (comP) [Bacillus paralicheniformis strain SUBG0010]
MKSSLKFISILLVLLSFVYSIYICYLCFNNAFEGAKLKYNSHNQLVVIEVEEHSLAEYAGLKKGDILLEIDGKSITKKRE
PAEDILSWAYSVTVKRDAEVVDINTKETFLGYDIFFVFLIPVTFYLLCLFCIFFILNSSKSKKLFSSTFLLIAFLLNVSI
AYLSAGGVSRGDVFSRYVNLLTFLSVPVSYLHFVYQYFKEKGKQFFNNKVFLLYLLPVINIIIEYFLGEDKLSIEVLSTI
NLSSFFIGVTMVFIVILYGLNKYKFSEQAYFLKILMLTNFIAIIPFVGFYVLPTLVLGDYIFPSVFVAPFLLLIPFSLVY
QFMANKIYNIEFILGRLRYYGLLAIIPTVIVVCIVTFTQYQTGGYNTVRLAIYIYLVMLGVFYLKEMLDFRFRLKRFSEK
FNYQDSIFKFTQTIRTFTSLNQVLLELKQTILDVLTVSQAHVLGVKSDGTISLLEGDTEEYPWIPYEQEVTKVITDIGKI
VEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWLNKL
MFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLYD
LGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYEDD
GIGFDPDKLYQNSASMGLSGIRERVRALNGNLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=531864 DI291_RS17100 WP_128823062.1 3380050..3382362(-) (comP) [Bacillus paralicheniformis strain SUBG0010]
TTGAAATCTTCATTAAAGTTTATTTCAATTTTGCTGGTTCTTTTAAGTTTTGTTTATAGTATTTATATTTGTTATCTCTG
TTTTAATAATGCATTTGAAGGTGCTAAATTAAAGTATAATTCGCATAATCAATTAGTCGTTATAGAAGTAGAAGAGCACT
CTCTTGCGGAATATGCCGGGCTTAAAAAAGGTGATATTCTTCTCGAGATTGATGGTAAATCTATAACCAAAAAGAGAGAG
CCAGCAGAAGACATTCTTTCGTGGGCTTACTCAGTCACGGTAAAACGGGATGCCGAAGTGGTGGATATCAATACCAAAGA
GACATTTCTTGGATATGATATATTTTTTGTGTTTTTGATCCCTGTAACTTTTTATTTATTATGCCTATTTTGTATTTTTT
TCATTTTAAATTCAAGTAAATCAAAGAAACTGTTTTCTTCAACTTTTTTATTGATTGCTTTTTTATTAAACGTTTCTATC
GCATATTTAAGTGCAGGTGGCGTATCTAGGGGTGATGTGTTTAGTAGATACGTAAATTTGCTGACATTTTTATCAGTGCC
CGTAAGTTACTTGCATTTTGTTTATCAGTATTTTAAAGAAAAAGGGAAACAATTTTTCAATAATAAAGTGTTTTTACTAT
ATCTCTTGCCGGTAATTAATATTATTATTGAATATTTTTTAGGTGAGGATAAACTATCAATTGAAGTTCTAAGCACCATA
AATTTGTCTTCTTTTTTTATTGGTGTAACCATGGTTTTCATCGTTATTTTATATGGATTAAATAAATATAAGTTTTCCGA
ACAGGCTTATTTTTTAAAGATATTGATGTTGACCAATTTTATAGCAATAATACCTTTTGTGGGCTTTTATGTTTTGCCAA
CTTTAGTTTTAGGAGATTACATATTTCCATCTGTCTTTGTTGCACCATTTCTTTTATTAATTCCATTTTCTCTAGTCTAT
CAATTTATGGCAAATAAAATATACAATATTGAGTTTATTCTAGGCAGACTAAGATATTATGGATTATTGGCGATTATACC
AACAGTAATCGTTGTATGTATAGTAACGTTTACACAATATCAAACAGGTGGCTACAATACAGTTAGACTCGCAATTTATA
TTTATCTTGTAATGCTTGGTGTATTTTATTTAAAAGAAATGCTAGACTTCCGTTTTCGCCTAAAGCGTTTTTCAGAGAAG
TTTAACTATCAAGACAGTATTTTTAAGTTTACTCAAACGATCCGGACATTTACCTCTTTGAACCAAGTACTGTTAGAATT
GAAGCAAACGATTCTGGATGTTCTAACCGTGAGTCAAGCGCATGTTTTAGGAGTTAAAAGCGACGGGACAATATCTTTGC
TCGAGGGAGATACCGAAGAATATCCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGCAAAATC
GTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGTTTT
AAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAAAACG
TCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTG
ATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTCCTT
GAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCATCA
ATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTACGAT
CTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATAC
GGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGG
TTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGAC
GGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGTATTCGCGAGCGAGTCCGCGC
GCTGAACGGCAATCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.679

100

0.536