Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   JNE32_RS20660 Genome accession   NZ_CP068982
Coordinates   3915709..3915828 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain pb2441     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3910709..3920828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE32_RS20640 (JNE32_20540) albG 3910872..3911573 (+) 702 WP_038427991.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  JNE32_RS20645 (JNE32_20545) ywhL 3911579..3912952 (-) 1374 WP_038427992.1 YncE family protein -
  JNE32_RS20650 (JNE32_20550) ywhK 3912995..3914350 (-) 1356 WP_038427993.1 YncE family protein -
  JNE32_RS22660 - 3914347..3914577 (-) 231 WP_009968328.1 hypothetical protein -
  JNE32_RS20655 (JNE32_20555) rapF 3914580..3915725 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  JNE32_RS20660 (JNE32_20560) phrF 3915709..3915828 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  JNE32_RS20665 (JNE32_20565) - 3916081..3916560 (+) 480 WP_038427994.1 hypothetical protein -
  JNE32_RS20670 (JNE32_20570) - 3916709..3917497 (+) 789 WP_015714893.1 membrane protein -
  JNE32_RS20675 (JNE32_20575) - 3917484..3918158 (+) 675 WP_015714894.1 hypothetical protein -
  JNE32_RS20680 (JNE32_20580) - 3918174..3918965 (+) 792 WP_250354594.1 hypothetical protein -
  JNE32_RS20685 (JNE32_20585) - 3918968..3919615 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  JNE32_RS20690 (JNE32_20590) - 3919608..3920168 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=531767 JNE32_RS20660 WP_009968329.1 3915709..3915828(+) (phrF) [Bacillus subtilis strain pb2441]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=531767 JNE32_RS20660 WP_009968329.1 3915709..3915828(+) (phrF) [Bacillus subtilis strain pb2441]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487