Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   K8P00_RS02105 Genome accession   NZ_CP082861
Coordinates   417743..418306 (-) Length   187 a.a.
NCBI ID   WP_049257748.1    Uniprot ID   -
Organism   Eikenella corrodens strain FDAARGOS_1474     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 412743..423306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8P00_RS02080 (K8P00_02070) pheT 413262..415622 (+) 2361 WP_003824825.1 phenylalanine--tRNA ligase subunit beta -
  K8P00_RS02085 (K8P00_02075) - 415689..416126 (-) 438 WP_049257746.1 type IV pilin protein -
  K8P00_RS02095 (K8P00_02080) pilK 416139..416663 (-) 525 WP_035581278.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  K8P00_RS02100 (K8P00_02085) - 416645..417736 (-) 1092 WP_003824829.1 PilW family protein -
  K8P00_RS02105 (K8P00_02090) pilV/pilI 417743..418306 (-) 564 WP_049257748.1 type IV pilus modification protein PilV Regulator
  K8P00_RS02110 (K8P00_02095) pilH 418326..418982 (-) 657 WP_141744157.1 GspH/FimT family pseudopilin Machinery gene
  K8P00_RS02115 (K8P00_02100) dnaB 419043..420431 (-) 1389 WP_023887936.1 replicative DNA helicase -
  K8P00_RS02120 (K8P00_02105) - 420827..422227 (-) 1401 WP_003824832.1 DEAD/DEAH box helicase -
  K8P00_RS02125 (K8P00_02110) - 422571..423260 (-) 690 WP_003824834.1 energy-coupling factor ABC transporter permease -

Sequence

Protein


Download         Length: 187 a.a.        Molecular weight: 20030.62 Da        Isoelectric Point: 6.2157

>NTDB_id=530540 K8P00_RS02105 WP_049257748.1 417743..418306(-) (pilV/pilI) [Eikenella corrodens strain FDAARGOS_1474]
MSNHKFILKPIHLNRGSTLLEVLISVFIMAFGIMALMLAQLKSVGNVREAEMQTRVAQAVQNLSAGMLSNPDVINNIGTH
SAATTKFTYTDYNKSTQNITPTSSAVDITVCGNATGIKRKALIACQLNAFTAELQNALPNATGISYAITSTSGDTPTTTI
EVKWTESNGDTQNSDDFNYSYSAVVGD

Nucleotide


Download         Length: 564 bp        

>NTDB_id=530540 K8P00_RS02105 WP_049257748.1 417743..418306(-) (pilV/pilI) [Eikenella corrodens strain FDAARGOS_1474]
ATGTCTAATCATAAATTCATATTAAAGCCGATACATCTTAATCGAGGTAGTACTCTATTAGAAGTGCTCATTTCTGTATT
TATTATGGCATTTGGCATTATGGCTCTTATGCTTGCACAATTAAAATCTGTGGGTAACGTCCGTGAAGCAGAAATGCAAA
CTCGTGTTGCTCAGGCCGTACAGAACCTATCTGCTGGTATGTTAAGCAACCCTGATGTAATCAATAATATTGGCACTCAC
TCAGCTGCCACAACCAAATTCACCTACACCGACTATAATAAATCAACACAAAATATTACTCCTACATCATCTGCCGTCGA
TATTACCGTATGTGGTAATGCAACCGGCATAAAGCGTAAGGCTCTCATCGCCTGCCAACTAAATGCATTTACTGCAGAAC
TGCAAAATGCATTACCCAATGCGACCGGCATTTCATATGCAATTACTAGTACCTCTGGTGATACGCCCACTACTACAATC
GAGGTAAAATGGACAGAAAGTAATGGGGATACTCAAAATTCCGATGACTTTAACTATAGCTATAGTGCGGTTGTAGGAGA
CTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

36.318

100

0.39
  pilV Neisseria meningitidis 8013

36.364

100

0.385