Detailed information NTG0052929

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: U712_RS13265
• Genome accession: NC_022898
• Coordinates: 2654019..2654624 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis PY79
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2649019..2659624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U712_RS13235 (U712_13630)	-	2649832..2650221 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
U712_RS13240 (U712_13635)	yajC	2650278..2650544 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
U712_RS13245 (U712_13640)	tgt	2650581..2651726 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
U712_RS13250 (U712_13645)	queA	2651753..2652781 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
U712_RS13255 (U712_13650)	yrzS	2652811..2653011 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
U712_RS13260 (U712_13655)	ruvB	2653004..2654008 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
U712_RS13265 (U712_13660)	ruvA	2654019..2654624 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
U712_RS13270 (U712_13665)	bofC	2654763..2655275 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
U712_RS13275 (U712_13670)	csbX	2655323..2656630 (-)	1308	WP_003246197.1	MFS transporter	-
U712_RS13280 (U712_13675)	iolG	2656701..2657726 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
U712_RS13285 (U712_13680)	yrzF	2657964..2658611 (+)	648	WP_003246159.1	phosphotransferase	-
U712_RS21340 (U712_13685)	-	2658657..2658779 (-)	123	WP_003229707.1	hypothetical protein	-
U712_RS21345 (U712_13690)	yrzH	2658864..2659154 (+)	291	WP_003246047.1	DUF5412 family protein	-
U712_RS20840 (U712_13695)	-	2659161..2659301 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=52929 U712_RS13265 WP_003229717.1 2654019..2654624(-) (ruvA) [Bacillus subtilis PY79]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=52929 U712_RS13265 WP_003229717.1 2654019..2654624(-) (ruvA) [Bacillus subtilis PY79]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408