Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   JKL50_RS16815 Genome accession   NZ_CP068389
Coordinates   3274479..3276791 (+) Length   770 a.a.
NCBI ID   WP_035701206.1    Uniprot ID   A0AB39J089
Organism   Bacillus altitudinis strain ws31     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3269479..3281791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKL50_RS16790 (JKL50_16790) - 3270943..3272169 (+) 1227 WP_202734717.1 EAL and HDOD domain-containing protein -
  JKL50_RS16795 (JKL50_16795) - 3272206..3272559 (-) 354 WP_019744042.1 hypothetical protein -
  JKL50_RS16800 (JKL50_16800) degQ 3273065..3273205 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  JKL50_RS16805 (JKL50_16805) - 3273357..3274271 (+) 915 WP_202734256.1 polyprenyl synthetase family protein -
  JKL50_RS16810 (JKL50_16810) comX 3274268..3274438 (+) 171 WP_074041927.1 competence pheromone ComX -
  JKL50_RS16815 (JKL50_16815) comP 3274479..3276791 (+) 2313 WP_035701206.1 ATP-binding protein Regulator
  JKL50_RS16820 (JKL50_16820) comA 3276872..3277513 (+) 642 WP_007500477.1 response regulator transcription factor Regulator
  JKL50_RS16825 (JKL50_16825) - 3277537..3277926 (+) 390 WP_008345855.1 hotdog fold thioesterase -
  JKL50_RS16830 (JKL50_16830) mnhG 3278017..3278391 (-) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  JKL50_RS16835 (JKL50_16835) - 3278375..3278656 (-) 282 WP_035389259.1 Na(+)/H(+) antiporter subunit F1 -
  JKL50_RS16840 (JKL50_16840) - 3278656..3279135 (-) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  JKL50_RS16845 (JKL50_16845) - 3279142..3280620 (-) 1479 WP_019744043.1 Na+/H+ antiporter subunit D -
  JKL50_RS16850 (JKL50_16850) - 3280613..3280954 (-) 342 WP_008345845.1 Na(+)/H(+) antiporter subunit C -
  JKL50_RS16855 (JKL50_16855) - 3280954..3281385 (-) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89674.24 Da        Isoelectric Point: 7.1527

>NTDB_id=528857 JKL50_RS16815 WP_035701206.1 3274479..3276791(+) (comP) [Bacillus altitudinis strain ws31]
MKITYTKLSAFFVFLSFLFVIYVSYIYVFDIFNGARVEENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGESANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEIQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVITFCLSSVFIFYIHFIYQYFKEFDLHITTRKTIYILYSLPITNLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMQKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFIAITPTILVVVTFYILQKPEDLKYTLKLAFITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKANGEMIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=528857 JKL50_RS16815 WP_035701206.1 3274479..3276791(+) (comP) [Bacillus altitudinis strain ws31]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTTGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTTGAGGAGAACAAGAATGGTCAAGCAGAAGTTGTCAAAGTCGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGAGAATCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTCGTATTAACAAAGAGATCCAACGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCGGGTATTGGTGATAGATTTAGCCATTATGTCATCACATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCGAAAAACAATTTATATTTTATATA
GTCTTCCTATAACTAATCTAGTAATAGAGCTGTTTGTTCCAATTGATTCGGCGATAGCCAGATACATGCCGAGTTTAAAT
CTTTTATTCTTTTTTGCTTCTATTATCATGTCATTCAAAGTCATTATTAATGGAATGCAGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTTTGTCCGTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTCTTAACTTCTTTTGTATTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTTAAATACTATGGATTTATTGCCATTACACCGAC
CATTTTAGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTAAAGTACACACTGAAGCTCGCATTCATCACAT
ATACACTCATGTTGGCTGTTTTCTATTTCAAAGAAATTTTAGATTTCCGTTTTCGTTTGAAACGTTTTTCAGAGAAGTAT
AATTACCAAGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTACTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTCGTTGTGAATAAAGCCTTTGTGCTAGAGGTGAAGGCTAATGGAGAAATGATTGAAATTG
ATGAATCAACAAATGATAGTAAGTTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGGAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGAGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACGCCGAAATTGACACGCGATGAAATCTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATTGAAGAATTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTC
ATGTTCGCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACT
GAAGAGACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCGCTGATCTCTT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGACTTG
GGGTTAGTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCG
CTTTGATAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGT
TGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGAT
GGAGTCGGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGAGAACGAGTCAAAGC
TCTAAATGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.645

100

0.49