Detailed information NTG0528850

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JKL50_RS15075
• Genome accession: NZ_CP068389
• Coordinates: 2930422..2931597 (+)
• Length: 391 a.a.
• NCBI ID: WP_202734188.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain ws31
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2925422..2936597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JKL50_RS15055 (JKL50_15055)	tuaH	2925970..2927217 (+)	1248	WP_017368143.1	teichuronic acid biosynthesis protein TuaH	-
JKL50_RS15060 (JKL50_15060)	-	2927352..2928419 (+)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
JKL50_RS15065 (JKL50_15065)	-	2928456..2929547 (-)	1092	WP_025208065.1	LCP family protein	-
JKL50_RS15070 (JKL50_15070)	-	2929532..2930200 (-)	669	WP_017357860.1	YigZ family protein	-
JKL50_RS15075 (JKL50_15075)	degS	2930422..2931597 (+)	1176	WP_202734188.1	sensor histidine kinase	Regulator
JKL50_RS15080 (JKL50_15080)	degU	2931662..2932351 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
JKL50_RS15085 (JKL50_15085)	-	2932563..2933405 (+)	843	WP_024719242.1	DegV family protein	-
JKL50_RS15090 (JKL50_15090)	comFA	2933525..2934904 (+)	1380	WP_142759403.1	DEAD/DEAH box helicase	Machinery gene
JKL50_RS15095 (JKL50_15095)	-	2934969..2935262 (+)	294	WP_035701582.1	late competence development ComFB family protein	-
JKL50_RS15100 (JKL50_15100)	-	2935223..2935945 (+)	723	WP_390308590.1	ComF family protein	-
JKL50_RS15105 (JKL50_15105)	-	2936002..2936421 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45481.17 Da
• Isoelectric Point: 5.8757

>NTDB_id=528850 JKL50_RS15075 WP_202734188.1 2930422..2931597(+) (degS) [Bacillus altitudinis strain ws31]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANAMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFVMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=528850 JKL50_RS15075 WP_202734188.1 2930422..2931597(+) (degS) [Bacillus altitudinis strain ws31]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTGGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGCGATGATGCGTTCAGAGCTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGGCAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTTCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAACTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTAACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTAGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCGTCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.195	98.465	0.839