Detailed information NTG0528412

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: JHW37_RS09895
• Genome accession: NZ_CP068238
• Coordinates: 2110617..2112839 (+)
• Length: 740 a.a.
• NCBI ID: WP_053816989.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain A39-1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2105617..2117839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHW37_RS09870 (JHW37_09870)	-	2105910..2106509 (-)	600	WP_043102414.1	PilZ domain-containing protein	-
JHW37_RS09875 (JHW37_09875)	-	2106612..2107862 (+)	1251	WP_003156868.1	lipoprotein-releasing ABC transporter permease subunit	-
JHW37_RS09880 (JHW37_09880)	lolD	2107855..2108538 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
JHW37_RS09885 (JHW37_09885)	-	2108608..2109852 (+)	1245	WP_003156869.1	lipoprotein-releasing ABC transporter permease subunit	-
JHW37_RS09890 (JHW37_09890)	-	2109953..2110486 (-)	534	WP_034078473.1	DUF2062 domain-containing protein	-
JHW37_RS09895 (JHW37_09895)	comA	2110617..2112839 (+)	2223	WP_053816989.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JHW37_RS09900 (JHW37_09900)	exbB	2112912..2113547 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
JHW37_RS09905 (JHW37_09905)	-	2113544..2113984 (+)	441	WP_012075163.1	ExbD/TolR family protein	-
JHW37_RS09910 (JHW37_09910)	lpxK	2113984..2114982 (+)	999	WP_053813705.1	tetraacyldisaccharide 4'-kinase	-
JHW37_RS09915 (JHW37_09915)	-	2115020..2115205 (+)	186	WP_003157522.1	Trm112 family protein	-
JHW37_RS09920 (JHW37_09920)	kdsB	2115205..2115969 (+)	765	WP_012075164.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
JHW37_RS09925 (JHW37_09925)	-	2115969..2116433 (+)	465	WP_012075165.1	low molecular weight protein-tyrosine-phosphatase	-
JHW37_RS09930 (JHW37_09930)	murB	2116430..2117449 (+)	1020	WP_053813706.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 79734.15 Da
• Isoelectric Point: 10.8582

>NTDB_id=528412 JHW37_RS09895 WP_053816989.1 2110617..2112839(+) (comA) [Pseudomonas aeruginosa strain A39-1]
MRLGLPALAAGLLALRLLPELPSAGWLLAAAAAGLLLLFGRLYWLGLFLLGFAWACVSAQAALDGRLAAELDGRTLWLEG
RISGLPASGNGVTRFQLEDVSSPREALPARLRLSWRGAPPLMGGERWRLAVNLKRPRGLVNTAGFDYEAWLLAQRIGAIG
TVKAGERLRPASGLDAWRDAWRQRLLAADTQGRGGALAALVLGDGSGLRADEWRMLQDTGTVHLMVISGSHISLLAGMLY
GLVAGLFRLGCWPRRLPWLPCACGLALAGAWGYGLMAGFEVPVRRACLMVSLALLWRLRFRHLGVSRPLLGTLVLVLLAE
PLACLQAGFWLSFLAVALLLWLFAGRLGRWRWWTAWGRAQWGMALGLAMPSLALGLPLSLSGALANLLAVPWVEMLVVPP
ALAGSLLLGVPGVGESLLWIAGASLDQLFRLLVLLAGLAGAWQPPAATAWGVALGMLGALCWLAPAGLPVRGLGALLMLP
ALAPSLRPIEAGYAEVRMLDVGQGLAVLLRTRGHALLYDAGARQGDFDMGERVVLPVLRSLDLRRLDGLLLSHADNDHAG
GAPAVVSRFAPSWVVSGEPARLPSSLAARGCEERRWEWDGVTFAQWSWARADSANDRSCVLRVEARGEVLLLTGDIARAA
EYAWLARQGEPRVDWLQAPHHGSRSSSGEAFVRRTRPRHVLVSRGWRNAFGHPHAEVVQRYAGIAAQIHDTARDGALTFT
LGRGGEARGEREAAHFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=528412 JHW37_RS09895 WP_053816989.1 2110617..2112839(+) (comA) [Pseudomonas aeruginosa strain A39-1]
ATGCGCCTGGGATTGCCAGCTCTCGCCGCGGGGCTGCTGGCCCTGCGCCTGCTGCCGGAGTTGCCGTCGGCTGGCTGGTT
GCTGGCGGCGGCCGCCGCCGGTCTGCTGCTGCTCTTCGGCCGTCTCTACTGGCTGGGTCTGTTCCTGCTCGGCTTCGCCT
GGGCCTGCGTGTCGGCACAGGCCGCGCTGGACGGGCGCCTCGCCGCCGAGCTGGATGGCCGGACGCTATGGCTGGAAGGG
CGTATCAGCGGCCTGCCGGCAAGCGGGAATGGCGTCACGCGCTTCCAGTTGGAGGACGTGAGCAGCCCGCGCGAAGCGCT
GCCTGCCCGCCTACGCCTGAGCTGGCGCGGCGCGCCGCCGCTCATGGGGGGTGAGCGCTGGCGCCTGGCGGTGAACCTGA
AGCGGCCGCGCGGCCTGGTGAATACGGCGGGCTTCGATTACGAAGCCTGGCTACTGGCGCAGCGGATCGGCGCCATCGGC
ACGGTGAAGGCGGGCGAGCGGTTGCGTCCGGCCAGCGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGTCTGCTCGC
GGCGGATACCCAGGGTCGCGGCGGCGCGCTGGCGGCGCTGGTGCTGGGAGACGGCTCAGGCTTGCGCGCGGATGAATGGC
GCATGCTCCAGGACACCGGCACCGTGCACCTGATGGTGATTTCCGGATCGCATATCTCGCTGTTGGCGGGAATGCTCTAT
GGCCTGGTGGCGGGCCTGTTCCGCCTGGGTTGCTGGCCTCGCCGCCTGCCCTGGCTGCCCTGCGCCTGCGGCCTGGCGCT
GGCTGGTGCCTGGGGCTACGGGCTGATGGCGGGATTCGAGGTGCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGGCGT
TGCTCTGGCGCCTGCGCTTCCGTCACCTGGGCGTGTCGAGGCCGCTGCTCGGGACGCTGGTGCTGGTGCTCCTGGCGGAG
CCGCTGGCCTGCCTGCAGGCGGGATTCTGGCTGTCGTTCCTGGCGGTGGCGCTGCTGCTCTGGCTGTTCGCCGGGCGCCT
CGGGCGCTGGCGCTGGTGGACGGCCTGGGGGCGGGCGCAATGGGGCATGGCGCTGGGGCTGGCGATGCCGTCGCTGGCGC
TGGGCTTGCCGTTGAGCCTGAGCGGGGCGCTGGCGAACCTGCTGGCGGTGCCCTGGGTAGAAATGCTGGTAGTGCCGCCG
GCCCTGGCCGGGAGCCTGTTGCTCGGTGTGCCTGGCGTGGGCGAGAGCCTGTTGTGGATCGCTGGCGCCTCGCTGGACCA
ACTGTTCCGCCTGCTCGTCCTGCTGGCGGGGCTGGCCGGGGCCTGGCAGCCGCCTGCCGCCACGGCCTGGGGCGTCGCCC
TGGGAATGCTCGGCGCGCTCTGCTGGCTGGCGCCAGCCGGGTTGCCGGTGCGAGGCCTGGGGGCGTTGCTGATGCTACCG
GCGCTGGCGCCGTCGCTGCGACCGATCGAGGCGGGGTATGCCGAGGTGCGGATGCTGGATGTCGGCCAGGGGCTGGCGGT
GCTGCTGCGTACCCGCGGGCACGCGCTGCTGTATGACGCCGGTGCGCGACAGGGCGACTTCGACATGGGCGAGCGGGTGG
TCCTGCCGGTGCTGCGCAGCCTCGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGCCACGCCGACAACGACCATGCCGGT
GGCGCGCCTGCGGTGGTTTCCCGTTTCGCCCCGAGCTGGGTGGTCAGTGGCGAGCCGGCGCGCCTGCCGTCGTCGCTGGC
GGCGCGGGGATGCGAGGAGCGGCGCTGGGAGTGGGACGGCGTGACCTTCGCCCAGTGGTCTTGGGCCCGGGCTGACAGCG
CTAACGACCGTTCCTGCGTGTTGCGGGTGGAAGCGCGCGGCGAGGTGCTGCTGCTGACCGGCGACATCGCGCGCGCTGCC
GAGTACGCCTGGCTGGCGCGCCAGGGCGAGCCGCGGGTCGACTGGTTGCAGGCGCCACATCATGGCAGTCGCAGTTCCTC
CGGAGAGGCCTTCGTGCGACGGACCCGGCCGCGCCATGTGCTGGTCTCGCGGGGTTGGCGCAATGCCTTCGGCCATCCTC
ATGCGGAAGTGGTGCAGCGCTACGCCGGCATCGCCGCGCAGATCCACGACACCGCTCGCGACGGAGCCCTGACCTTTACC
CTGGGGCGCGGCGGGGAGGCACGCGGGGAGCGTGAAGCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-677)

• Competence protein (Competence) (200-463)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.306	97.297	0.577
comA	Ralstonia pseudosolanacearum GMI1000	35.033	100	0.362