Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   I6J09_RS03370 Genome accession   NZ_CP068216
Coordinates   702562..703605 (-) Length   347 a.a.
NCBI ID   WP_017637854.1    Uniprot ID   A0A654BBJ5
Organism   Staphylococcus pasteuri strain FDAARGOS_1152     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 697562..708605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J09_RS03340 (I6J09_03335) - 697972..699213 (-) 1242 WP_208969981.1 aminopeptidase -
  I6J09_RS03345 (I6J09_03340) - 699227..699409 (-) 183 WP_037555624.1 DUF1128 domain-containing protein -
  I6J09_RS03350 (I6J09_03345) - 699571..700035 (+) 465 WP_017637850.1 low molecular weight protein-tyrosine-phosphatase -
  I6J09_RS03355 (I6J09_03350) - 700040..700324 (+) 285 WP_017637851.1 hypothetical protein -
  I6J09_RS03360 (I6J09_03355) - 700614..701852 (+) 1239 WP_017637852.1 YihY/virulence factor BrkB family protein -
  I6J09_RS03365 (I6J09_03360) vraR 701943..702572 (-) 630 WP_017637853.1 two-component system response regulator VraR Regulator
  I6J09_RS03370 (I6J09_03365) vraS 702562..703605 (-) 1044 WP_017637854.1 sensor histidine kinase Regulator
  I6J09_RS03375 (I6J09_03370) liaF 703602..704303 (-) 702 WP_017637855.1 cell wall-active antibiotics response protein LiaF -
  I6J09_RS03380 (I6J09_03375) - 704318..704704 (-) 387 WP_119622838.1 DUF2543 family protein -
  I6J09_RS03385 (I6J09_03380) map 704855..705610 (-) 756 WP_208969982.1 type I methionyl aminopeptidase -
  I6J09_RS03390 (I6J09_03385) - 705776..706762 (+) 987 WP_208969983.1 FUSC family protein -
  I6J09_RS03395 (I6J09_03390) - 707147..707872 (-) 726 WP_046467432.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40047.46 Da        Isoelectric Point: 6.2449

>NTDB_id=528141 I6J09_RS03370 WP_017637854.1 702562..703605(-) (vraS) [Staphylococcus pasteuri strain FDAARGOS_1152]
MNHYIRAIGSMLILTYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNIIVILLCIIVGSVLAYKINQQNDWINS
QIERSIEGETVGINDQNIELYSETLEIYHTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPVLEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QEFKVPKGIEDHLFRITQEAISNTLRHSNGTRVTVELFNKQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYGD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=528141 I6J09_RS03370 WP_017637854.1 702562..703605(-) (vraS) [Staphylococcus pasteuri strain FDAARGOS_1152]
ATGAATCACTATATAAGAGCAATAGGCTCTATGCTCATTTTAACGTATAGTATGTTAACCGCATTTTTATTTATTGATAA
AGTATTTGTTAACATCATCTATTTTCAAGGTATGTTCTATACACAGATTTTTGGCATACCTGTATTCTTATTTTTAAATA
TCATAGTGATATTATTATGTATCATTGTAGGCTCTGTTTTAGCTTATAAAATTAATCAACAGAATGACTGGATTAATTCT
CAAATAGAACGATCTATTGAAGGTGAAACAGTTGGTATCAATGACCAAAATATAGAATTATATAGTGAAACACTGGAAAT
ATATCATACACTTGTACCATTAAATCAGGAATTACATCGATTAAGAATGAAAACACAAAACTTAACTAATGAAAACTACA
ACATGAACGATGTAAAAGTTAAAAAGATTATTGAAGACGAAAGACAACGTCTAGCTAGAGAATTACATGACTCAGTAAGT
CAACAATTATTCGCTGCGAGTATGATGTTATCAGCGATTAAAGAAACTAAATTAGAACCCCCATTAGACCAACAAATTCC
AGTTTTAGAGAAAATGGTACAAGATTCACAACTTGAAATGAGAGCTTTATTATTACATTTACGACCTCTAGGGTTGAAAG
ATAAGTCCTTAGGTGAAGGAATTAAAGATTTAGTTATAGATCTTCAAAAGAAAGTTCCGATGAAAGTTGTACATGAAATA
CAAGAATTTAAAGTTCCTAAAGGTATCGAAGATCATTTATTTAGAATTACTCAAGAAGCTATTTCAAATACATTAAGACA
TTCTAATGGCACTAGAGTGACGGTTGAACTATTTAATAAGCAAGATTATTTATTATTACGTATACAAGATAATGGTAAAG
GCTTTAATGTAGATGAAAAATTGGAACAAAGCTATGGTTTAAAAAATATGAGAGAACGTGCATTAGAAATTGGTGCTACA
TTCCATATCGTTTCGTTACCTGATTCCGGAACACGTATAGAAGTTAAAGCCCCATTGAACAAGGAGGATTCTTATGGCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A654BBJ5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

94.524

100

0.945