Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   I6J09_RS03365 Genome accession   NZ_CP068216
Coordinates   701943..702572 (-) Length   209 a.a.
NCBI ID   WP_017637853.1    Uniprot ID   A0AAW7YTG2
Organism   Staphylococcus pasteuri strain FDAARGOS_1152     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 696943..707572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J09_RS03335 (I6J09_03330) - 697387..697917 (-) 531 WP_017637847.1 acyl-CoA thioesterase -
  I6J09_RS03340 (I6J09_03335) - 697972..699213 (-) 1242 WP_208969981.1 aminopeptidase -
  I6J09_RS03345 (I6J09_03340) - 699227..699409 (-) 183 WP_037555624.1 DUF1128 domain-containing protein -
  I6J09_RS03350 (I6J09_03345) - 699571..700035 (+) 465 WP_017637850.1 low molecular weight protein-tyrosine-phosphatase -
  I6J09_RS03355 (I6J09_03350) - 700040..700324 (+) 285 WP_017637851.1 hypothetical protein -
  I6J09_RS03360 (I6J09_03355) - 700614..701852 (+) 1239 WP_017637852.1 YihY/virulence factor BrkB family protein -
  I6J09_RS03365 (I6J09_03360) vraR 701943..702572 (-) 630 WP_017637853.1 two-component system response regulator VraR Regulator
  I6J09_RS03370 (I6J09_03365) vraS 702562..703605 (-) 1044 WP_017637854.1 sensor histidine kinase Regulator
  I6J09_RS03375 (I6J09_03370) liaF 703602..704303 (-) 702 WP_017637855.1 cell wall-active antibiotics response protein LiaF -
  I6J09_RS03380 (I6J09_03375) - 704318..704704 (-) 387 WP_119622838.1 DUF2543 family protein -
  I6J09_RS03385 (I6J09_03380) map 704855..705610 (-) 756 WP_208969982.1 type I methionyl aminopeptidase -
  I6J09_RS03390 (I6J09_03385) - 705776..706762 (+) 987 WP_208969983.1 FUSC family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23553.14 Da        Isoelectric Point: 4.7051

>NTDB_id=528140 I6J09_RS03365 WP_017637853.1 701943..702572(-) (vraR) [Staphylococcus pasteuri strain FDAARGOS_1152]
MAIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGESGKDAIAKAHELQPDLILMDLLMDDMDGVEATTEIKKDLPQIKVV
MLTSFIEDKEVYRALDAGVDSYILKTTSASDIAEAVRKTYNGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ

Nucleotide


Download         Length: 630 bp        

>NTDB_id=528140 I6J09_RS03365 WP_017637853.1 701943..702572(-) (vraR) [Staphylococcus pasteuri strain FDAARGOS_1152]
ATGGCGATTAAAGTATTATTTGTAGATGACCATGAAATGGTTAGGATAGGGATATCAAGTTATTTATCAACACAATCCGA
CATTGAAGTAGTAGGTGAAGGAGAATCTGGTAAAGATGCAATAGCTAAAGCGCATGAATTGCAACCCGATTTAATATTGA
TGGATTTACTAATGGATGATATGGATGGTGTAGAAGCTACAACAGAAATAAAAAAAGATTTACCACAAATTAAAGTAGTT
ATGTTAACAAGTTTTATTGAAGATAAAGAAGTTTATCGTGCTTTAGATGCAGGTGTAGATAGTTATATTTTAAAAACAAC
TAGTGCAAGTGATATAGCTGAAGCGGTTCGTAAAACTTATAATGGTGAATCTGTTTTTGAACCAGAAGTATTAGTGAAAA
TGCGAAATAGAATGAAAAAACGTGCAGAATTATATGAAATGTTAACAGAAAGAGAAATGGAAATCTTATTATTAATTGCA
AAAGGTTATTCCAATCAGGAAATTGCCAGTGCTTCACATATTACAATTAAAACTGTTAAAACACATGTTAGTAATATATT
AAGTAAATTAGAAGTACAAGATAGAACACAAGCTGTAATTTATGCATTTCAACATAATCTTATCCAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-202)

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

94.737

100

0.947
  degU Bacillus subtilis subsp. subtilis str. 168

34.375

100

0.368