Detailed information NTG0528052

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: I6J13_RS05930
• Genome accession: NZ_CP068213
• Coordinates: 1226129..1226446 (-)
• Length: 105 a.a.
• NCBI ID: WP_006269985.1
• Uniprot ID: A0AAW7NV61
• Organism: Streptococcus constellatus strain FDAARGOS_1156
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1221129..1231446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J13_RS05900 (I6J13_05900)	-	1222464..1223663 (-)	1200	WP_006269979.1	acetate kinase	-
I6J13_RS05905 (I6J13_05905)	comYH	1223710..1224663 (-)	954	WP_006269998.1	class I SAM-dependent methyltransferase	Machinery gene
I6J13_RS05910 (I6J13_05910)	comGG	1224748..1225074 (-)	327	WP_003070783.1	competence type IV pilus minor pilin ComGG	-
I6J13_RS05915 (I6J13_05915)	comGF/cglF	1225055..1225492 (-)	438	WP_006270001.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6J13_RS05920 (I6J13_05920)	comGE/cglE	1225476..1225769 (-)	294	WP_006269989.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6J13_RS05925 (I6J13_05925)	comYD	1225741..1226139 (-)	399	WP_006269995.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6J13_RS05930 (I6J13_05930)	comYC	1226129..1226446 (-)	318	WP_006269985.1	competence type IV pilus major pilin ComGC	Machinery gene
I6J13_RS05935 (I6J13_05935)	comYB	1226443..1227465 (-)	1023	WP_037565861.1	competence type IV pilus assembly protein ComGB	Machinery gene
I6J13_RS05940 (I6J13_05940)	comYA	1227407..1228348 (-)	942	WP_006269992.1	competence type IV pilus ATPase ComGA	Machinery gene
I6J13_RS05945 (I6J13_05945)	-	1228418..1228783 (-)	366	WP_006269973.1	DUF1033 family protein	-
I6J13_RS05950 (I6J13_05950)	glnA	1228971..1230317 (-)	1347	WP_006269977.1	type I glutamate--ammonia ligase	-
I6J13_RS05955 (I6J13_05955)	-	1230356..1230715 (-)	360	WP_003070793.1	MerR family transcriptional regulator	-
I6J13_RS05960 (I6J13_05960)	-	1230792..1231322 (-)	531	WP_006269975.1	aromatic acid exporter family protein	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11650.77 Da
• Isoelectric Point: 10.1006

>NTDB_id=528052 I6J13_RS05930 WP_006269985.1 1226129..1226446(-) (comYC) [Streptococcus constellatus strain FDAARGOS_1156]
MKKIKNIKVKAFTLVEMLVVLLIISVLMLLFVPNLTKQKEAVTEKGNAAVVKVVESQAELFEVNHTNEKATLSKLVSEGT
ITDKQAASYKAYYAKHTKEARTVAD

Nucleotide

• Length: 318 bp

>NTDB_id=528052 I6J13_RS05930 WP_006269985.1 1226129..1226446(-) (comYC) [Streptococcus constellatus strain FDAARGOS_1156]
ATGAAAAAAATTAAAAATATAAAGGTAAAAGCTTTCACTTTGGTGGAAATGTTAGTGGTGCTTCTAATCATCAGTGTTTT
GATGCTTTTGTTTGTTCCGAATTTGACCAAACAAAAAGAAGCTGTAACGGAAAAAGGAAATGCAGCTGTTGTGAAGGTTG
TCGAAAGTCAGGCAGAGCTTTTTGAAGTGAATCACACTAATGAAAAAGCGACGCTTTCAAAATTAGTCAGTGAAGGAACT
ATTACAGACAAGCAAGCAGCATCATACAAGGCTTATTATGCAAAACATACAAAAGAAGCTCGCACAGTTGCAGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	72.381	100	0.724
comYC	Streptococcus mutans UA140	68.571	100	0.686
comYC	Streptococcus mutans UA159	68.571	100	0.686
comGC/cglC	Streptococcus mitis NCTC 12261	69.608	97.143	0.676
comGC/cglC	Streptococcus mitis SK321	68.627	97.143	0.667
comGC/cglC	Streptococcus pneumoniae Rx1	66.667	97.143	0.648
comGC/cglC	Streptococcus pneumoniae D39	66.667	97.143	0.648
comGC/cglC	Streptococcus pneumoniae TIGR4	66.667	97.143	0.648
comGC/cglC	Streptococcus pneumoniae R6	66.667	97.143	0.648
comGC	Lactococcus lactis subsp. cremoris KW2	55.769	99.048	0.552
comYC	Streptococcus suis isolate S10	64.045	84.762	0.543