Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   BAJP3144_RS08370 Genome accession   NZ_CP082283
Coordinates   1665833..1667101 (+) Length   422 a.a.
NCBI ID   WP_014721183.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP3144     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1660833..1672101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3144_RS08345 (BAJP3144_08345) pyrH 1661628..1662350 (+) 723 WP_003154213.1 UMP kinase -
  BAJP3144_RS08350 (BAJP3144_08350) frr 1662353..1662910 (+) 558 WP_003154212.1 ribosome recycling factor -
  BAJP3144_RS08355 (BAJP3144_08355) - 1663036..1663818 (+) 783 WP_014417783.1 isoprenyl transferase -
  BAJP3144_RS08360 (BAJP3144_08360) - 1663822..1664619 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  BAJP3144_RS08365 (BAJP3144_08365) dxr 1664675..1665826 (+) 1152 WP_003154208.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  BAJP3144_RS08370 (BAJP3144_08370) eeP 1665833..1667101 (+) 1269 WP_014721183.1 RIP metalloprotease RseP Regulator
  BAJP3144_RS08375 (BAJP3144_08375) proS 1667134..1668828 (+) 1695 WP_014417785.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 46504.45 Da        Isoelectric Point: 6.8866

>NTDB_id=528025 BAJP3144_RS08370 WP_014721183.1 1665833..1667101(+) (eeP) [Bacillus amyloliquefaciens strain JP3144]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLGKIVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLLRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=528025 BAJP3144_RS08370 WP_014721183.1 1665833..1667101(+) (eeP) [Bacillus amyloliquefaciens strain JP3144]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGTATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
TGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTCTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATCGCCTACGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGGGCAAAATTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGCATCAT
CAACTTATTGCGGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GACGGCTGCTGTTTTTATTCATTGAAGCGATCCGCGGCAAGCCGATTAACCGCGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains


Predicted by InterProScan.

(212-258)

(8-408)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403

  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4