Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   I6I50_RS17555 Genome accession   NZ_CP068195
Coordinates   3615361..3616068 (+) Length   235 a.a.
NCBI ID   WP_159152886.1    Uniprot ID   A0A2W5RI46
Organism   Acinetobacter johnsonii strain FDAARGOS_1093     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3610361..3621068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I50_RS17545 (I6I50_17545) clpB 3611821..3614400 (-) 2580 WP_201706607.1 ATP-dependent chaperone ClpB -
  I6I50_RS17550 (I6I50_17550) - 3614791..3615213 (-) 423 WP_004982311.1 OsmC family protein -
  I6I50_RS17555 (I6I50_17555) crp 3615361..3616068 (+) 708 WP_159152886.1 cAMP-activated global transcriptional regulator CRP Regulator
  I6I50_RS17560 (I6I50_17560) - 3616270..3617319 (+) 1050 WP_201706608.1 NADP(H)-dependent aldo-keto reductase -
  I6I50_RS17565 (I6I50_17565) - 3617446..3618219 (-) 774 WP_004982314.1 M48 family metallopeptidase -
  I6I50_RS17570 (I6I50_17570) - 3618406..3618711 (-) 306 WP_004696180.1 hypothetical protein -
  I6I50_RS17575 (I6I50_17575) - 3618912..3620231 (-) 1320 WP_004696178.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26366.88 Da        Isoelectric Point: 4.6178

>NTDB_id=527962 I6I50_RS17555 WP_159152886.1 3615361..3616068(+) (crp) [Acinetobacter johnsonii strain FDAARGOS_1093]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDDEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=527962 I6I50_RS17555 WP_159152886.1 3615361..3616068(+) (crp) [Acinetobacter johnsonii strain FDAARGOS_1093]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGAGAAATGGGTCTATTCGAAGCAAACTCACAACGTACTGCTGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTGACTTATGAAAACTTCCATGAACTCAGCAAACAATACCCTGACCTGAGCTATGCAGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACTACTCGTAAAGTGACTGACCTTGCATTCATCGATGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
CTATCTTCGCAGCCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTGAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCCTTAGAAGAGTCAAAAGCGAATGCTGATGACGATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2W5RI46

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.489

100

0.915
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4