Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   I6I51_RS14695 Genome accession   NZ_CP068187
Coordinates   2921304..2921702 (+) Length   132 a.a.
NCBI ID   WP_114836792.1    Uniprot ID   A0A7H8SDP5
Organism   Acinetobacter johnsonii strain FDAARGOS_1094     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2916304..2926702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I51_RS14680 (I6I51_14685) - 2917292..2919598 (+) 2307 WP_004979149.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  I6I51_RS14685 (I6I51_14690) - 2919638..2920405 (-) 768 WP_201702489.1 SDR family oxidoreductase -
  I6I51_RS14690 (I6I51_14695) mazG 2920524..2921285 (+) 762 WP_201702496.1 nucleoside triphosphate pyrophosphohydrolase -
  I6I51_RS14695 (I6I51_14700) comEA 2921304..2921702 (+) 399 WP_114836792.1 ComEA family DNA-binding protein Machinery gene
  I6I51_RS14700 (I6I51_14705) pcnB 2921840..2923309 (+) 1470 WP_201702499.1 polynucleotide adenylyltransferase PcnB -
  I6I51_RS14705 (I6I51_14710) folK 2923306..2923794 (+) 489 WP_004692303.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  I6I51_RS14710 (I6I51_14715) panB 2923831..2924640 (+) 810 WP_201702509.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  I6I51_RS14715 (I6I51_14720) panC 2924644..2925486 (+) 843 WP_078388723.1 pantoate--beta-alanine ligase -
  I6I51_RS14720 (I6I51_14725) rapZ 2925513..2926364 (+) 852 WP_004692298.1 RNase adapter RapZ -
  I6I51_RS14725 (I6I51_14730) - 2926361..2926630 (+) 270 WP_010325935.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14651.16 Da        Isoelectric Point: 10.8498

>NTDB_id=527920 I6I51_RS14695 WP_114836792.1 2921304..2921702(+) (comEA) [Acinetobacter johnsonii strain FDAARGOS_1094]
MIKIKVSLLIIALLLLSLLAWVPSSYAQSFDQNYLNWKAEQQAWDDRIQAPKSVKRAVSPVQAQPVLSANKISLNQASVD
QLQQLQGVGLKKAQAIVAYRQKQGPFKTIDELQQVRGIGPAIFAKNKTRLGL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=527920 I6I51_RS14695 WP_114836792.1 2921304..2921702(+) (comEA) [Acinetobacter johnsonii strain FDAARGOS_1094]
TTGATAAAAATAAAAGTAAGTTTGTTGATCATTGCGTTGTTATTACTGAGTCTACTGGCTTGGGTACCCAGTAGTTATGC
ACAGTCTTTTGATCAGAACTACCTGAACTGGAAAGCAGAGCAGCAGGCGTGGGATGATCGTATTCAAGCGCCAAAGAGCG
TGAAACGTGCTGTGTCTCCTGTTCAGGCTCAACCTGTGTTGAGCGCAAATAAAATTAGTTTAAATCAAGCCAGTGTCGAT
CAATTACAGCAGCTTCAGGGTGTGGGTTTAAAAAAGGCACAGGCAATTGTGGCCTATCGCCAGAAACAAGGGCCATTTAA
GACCATAGATGAACTACAACAGGTGCGCGGGATTGGACCGGCAATTTTTGCAAAAAATAAAACTCGTTTGGGCTTGTGA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(69-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SDP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

53.279

92.424

0.492
  comEA Acinetobacter baumannii D1279779

50.806

93.939

0.477
  comEA Acinetobacter baylyi ADP1

44.86

81.061

0.364